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Ptep_1.0

Organism name:
Parasteatoda tepidariorum (common house spider)
Isolate:
Goettingen
BioSample:
SAMN02364452
BioProject:
PRJNA167405
Submitter:
The i5k Initiative
Date:
2013/09/27
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000365465.1 (replaced)
RefSeq assembly accession:
GCF_000365465.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AOMJ01
Assembly method:
AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2
Genome coverage:
96.9x
Sequencing technology:
Illumina HiSeq

IDs: 66121 [UID] 790288 [GenBank] 3133158 [RefSeq]

See Genome Information for Parasteatoda tepidariorum

Pathogen Detection Resources

History (Show revision history)

Comment

A single genome assembly from a male and a female spiders

Global statistics

Total sequence length1,443,909,906
Total ungapped length1,178,918,113
Gaps between scaffolds0
Number of scaffolds31,445
Scaffold N50465,572
Scaffold L50816
Number of contigs263,833
Contig N5010,149
Contig L5030,893
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)263,833

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced1,443,909,90631,4451,178,918,113465,572232,3880
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