Format

Download Assemblies

Send to:

Choose Destination

Saccharomyces cerevisiae M3836 v1.0

Organism name:
Saccharomyces cerevisiae M3836 (baker's yeast)
Infraspecific name:
Strain: M3836
BioSample:
SAMN02769631
BioProject:
PRJNA174689
Submitter:
DOE Joint Genome Institute
Date:
2013/04/17
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000365065.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AMQC01
Assembly method:
Allpaths-LG v. R41043
Genome coverage:
172.6x
Sequencing technology:
Illumina

IDs: 608028 [UID] 608028 [GenBank]

See Genome Information for Saccharomyces cerevisiae

There are 787 assemblies for this organism

See more

History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/SacceM3836_1
JGI Project ID: 408872
The DNA was provided by Allan Froehlich(afroehlich@mascoma.com)
The strain is available from Allan Froehlich
Contacts: Alan Kuo (akuo@lbl.gov)
Assembly and annotation done by JGI.
The JGI and collaborators endorse the principles for the distribution and use of large ... scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length11,532,651
Total ungapped length11,498,676
Gaps between scaffolds0
Number of scaffolds52
Scaffold N50573,220
Scaffold L508
Number of contigs119
Contig N50259,428
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)119

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced11,532,6515211,498,676573,220670
Support Center