Format

Download Assemblies

Send to:

Choose Destination

Anop_step_SDA-500_V1

Organism name:
Anopheles stephensi (Asian malaria mosquito)
Infraspecific name:
Strain: SDA-500
BioSample:
SAMN02953837
BioProject:
PRJNA191554
Submitter:
Broad Institute
Date:
2013/03/28
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000349045.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
APCG01
Assembly method:
allpaths v. R43718
Genome coverage:
97.0x
Sequencing technology:
Illumina

IDs: 578378 [UID] 578378 [GenBank]

See Genome Information for Anopheles stephensi

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

VectorBase (www.vectorbase.org), a NIAID Bioinformatics Resource Center, is responsible for the assembled genome sequence and its annotation. For more information, contact info@vectorbase.org.

Global statistics

Total sequence length225,369,006
Total assembly gap length29,185,349
Gaps between scaffolds0
Number of scaffolds1,110
Scaffold N50837,295
Scaffold L5085
Number of contigs8,946
Contig N5072,570
Contig L50649
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)8,946

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced225,369,0061,110196,183,657837,2957,8360
Support Center