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Dekkera bruxellensis CBS 2499 v2.0

Organism name:
Brettanomyces bruxellensis CBS 2499 (budding yeasts)
Infraspecific name:
Strain: CBS 2499
BioSample:
SAMN00750237
BioProject:
PRJNA76499
Submitter:
JGI
Date:
2013/02/20
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000340765.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AHMD01
Assembly method:
Allpaths-LG v. R38445
Genome coverage:
127.5x
Sequencing technology:
Illumina

IDs: 554328 [UID] 554328 [GenBank]

See Genome Information for Brettanomyces bruxellensis

There are 14 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/Dekbr2
JGI Project ID: 402002
The DNA was provided by Mara Massel(m2chaos@gmail.com)
The strain is available from CBS Culture Collection
Contacts: Igor Grigoriev (ivgrigoriev@lbl.gov)
Assembly and annotation done by JGI.
The JGI and collaborators endorse the principles for the distribution and use of ... large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length13,355,945
Total ungapped length12,769,840
Gaps between scaffolds0
Number of scaffolds63
Scaffold N501,792,735
Scaffold L503
Number of contigs887
Contig N5030,855
Contig L50105
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)887

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced13,355,9456312,769,8401,792,7358240
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