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ASM33114v1

Organism name:
Cicer arietinum (chickpea)
Infraspecific name:
Cultivar: CDC Frontier
BioSample:
SAMN02981489
BioProject:
PRJNA175619
Submitter:
BGI-Shenzhen
Date:
2013/01/16
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000331145.1 (latest)
RefSeq assembly accession:
GCF_000331145.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
ANPC01
Assembly method:
SOAPdenovo v. 2.03
Genome coverage:
120x
Sequencing technology:
Illumina Hiseq 2000

IDs: 525138 [UID] 525138 [GenBank] 643438 [RefSeq]

See Genome Information for Cicer arietinum

There are 3 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length530,893,862
Total assembly gap length48,145,013
Gaps between scaffolds418
Number of scaffolds7,545
Scaffold N50697,963
Scaffold L50175
Number of contigs39,024
Contig N5034,102
Contig L504,088
Total number of chromosomes and plasmids9
Number of component sequences (WGS or clone)39,024

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_000331155.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome Ca1CM001764.1=NC_021160.10
Chromosome Ca2CM001765.1=NC_021161.10
Chromosome Ca3CM001766.1=NC_021162.10
Chromosome Ca4CM001767.1=NC_021163.10
Chromosome Ca5CM001768.1=NC_021164.10
Chromosome Ca6CM001769.1=NC_021165.10
Chromosome Ca7CM001770.1=NC_021166.10
Chromosome Ca8CM001771.1=NC_021167.10
unplacedn/an/an/a7,118

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All530,768,5437,544482,623,530697,96331,479418
Chromosome Ca148,359,9436544,266,2641,130,7292,13664
Chromosome Ca236,634,8545333,088,528939,9921,61452
Chromosome Ca339,989,0015337,349,9791,111,2551,77552
Chromosome Ca449,191,6824846,437,5551,678,1592,04847
Chromosome Ca548,169,1375743,646,5901,169,9592,05156
Chromosome Ca659,463,8987854,396,3961,139,4822,50277
Chromosome Ca748,961,5605645,740,4881,212,7382,27055
Chromosome Ca816,477,3021614,468,6101,425,59753515
unplaced183,521,1667,118163,229,120224,02716,5480
MoleculeTotal
Length
Chloroplast Pltd125,319
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