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ASM32574v1

Organism name:
Liberibacter crescens BT-1 (a-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: BT-1
BioSample:
SAMN02604174
BioProject:
PRJNA171392
Submitter:
University of Florida
Date:
2012/12/19
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000325745.1 (latest)
RefSeq assembly accession:
GCF_000325745.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 513938 [UID] 512658 [GenBank] 513938 [RefSeq]

See Genome Information for Liberibacter crescens

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::08/30/2020 02:24:37
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::4.12
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::1,371
CDSs (total)::1,312
Genes (coding)::1,253
CDSs (with protein)::1,253
Genes (RNA)::59
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::46
ncRNAs::4
Pseudo Genes (total)::59
CDSs (without protein)::59
Pseudo Genes (ambiguous residues)::0 of 59
Pseudo Genes (frameshifted)::51 of 59
Pseudo Genes (incomplete)::7 of 59
Pseudo Genes (internal stop)::6 of 59
Pseudo Genes (multiple problems)::4 of 59
##Genome-Annotation-Data-END##

Global statistics

Total sequence length1,504,659
Total ungapped length1,504,659
Total number of chromosomes and plasmids1

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PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000325755.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP003789.1=NC_019907.1

Assembly statistics

MoleculeTotal
Length
Chromosome 1,504,659
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