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Pmin_1.0

Organism name:
Patiria miniata (bat star)
BioSample:
SAMN02953819
BioProject:
PRJNA49323
Submitter:
Sea Urchin Genome Sequencing Consortium
Date:
2012/08/13
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000285935.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AKZP01
Assembly method:
CABOG v. 6.1; Newbler v. 2.3; ATLAS-LINK v. 1.0; ATLAS-GAPFILL v. 2.0
Genome coverage:
15.0x 454; 70x Illumina
Sequencing technology:
454; Illumina

IDs: 416698 [UID] 416698 [GenBank]

See Genome Information for Patiria miniata

History (Show revision history)

Global statistics

Total sequence length811,028,858
Total assembly gap length40,797,610
Gaps between scaffolds0
Number of scaffolds60,183
Scaffold N5052,614
Scaffold L504,640
Number of contigs179,756
Contig N509,466
Contig L5023,955
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)179,756

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced811,028,85860,183770,231,24852,614119,5730
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