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Ppap_1.0

Organism name:
Phlebotomus papatasi (flies)
BioSample:
SAMN02953817
BioProject:
PRJNA20293
Submitter:
Washington University Genome Sequencing Center
Date:
2012/05/16
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000262795.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AJVK01
Assembly method:
Newbler v. 2.6RC02
Genome coverage:
15.1x
Sequencing technology:
454; Sanger

IDs: 380418 [UID] 380418 [GenBank]

See Genome Information for Phlebotomus papatasi

History (Show revision history)

Comment

DNA isolated from a colony at University of Notre Dame maintained in MCDowell lab.

Global statistics

Total sequence length363,767,980
Total assembly gap length18,378,439
Gaps between scaffolds0
Number of scaffolds106,826
Scaffold N5027,956
Scaffold L502,066
Number of contigs139,199
Contig N505,795
Contig L5016,042
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)139,199

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced363,767,980106,826345,389,54127,95632,3730
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