Format

Download Assemblies

Send to:

Choose Destination

Lvar_2.2

Organism name:
Lytechinus variegatus (green sea urchin)
Isolate:
Lvar 01
Sex:
male
BioSample:
SAMN00205415
BioProject:
PRJNA62399
Submitter:
Baylor College of Medicine
Date:
2015/03/11
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000239495.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AGCV02
Assembly method:
CABOG (Celera Assembler) v. 2011/12/22; Newbler v. 2011/12/22; ATLAS-Link v. 1.0; ATLAS-GapFill v. 2.2; PBJelly2 v. 14.9.9
Genome coverage:
13x 454; 21x Illumina; 12.42x PacBio RS
Sequencing technology:
454; Illumina; PacBio RS

IDs: 310991 [UID] 1682468 [GenBank]

See Genome Information for Lytechinus variegatus

History (Show revision history)

Global statistics

Total sequence length1,061,195,396
Total assembly gap length57,125,815
Gaps between scaffolds0
Number of scaffolds322,794
Scaffold N5046,348
Scaffold L506,117
Number of contigs452,418
Contig N509,657
Contig L5026,801
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)452,418

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,061,195,396322,7941,004,069,58146,348129,6240
Support Center