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LER_WGS_1

Organism name:
Leucoraja erinacea (little skate)
BioSample:
SAMN00189066
BioProject:
PRJNA60893
Submitter:
North East Cyberinfrastructure Consortium
Date:
2011/12/15
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000238235.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AESE01
Assembly method:
CLCBio Genomics Workbench v. 4.0
Genome coverage:
26x
Sequencing technology:
Illumina GAIIx

IDs: 325098 [UID] 325098 [GenBank]

See Genome Information for Leucoraja erinacea

History (Show revision history)

Comment

The sequenced DNA sample was extracted from a single L. erinacea Stage 32 embryo of unknown gender, obtained from the Marine Biological Laboratory, Woods Hole, MA (USA).

Global statistics

Total sequence length1,555,461,038
Total assembly gap length0
Number of contigs2,962,366
Contig N50665
Contig L50586,231
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)2,962,366

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCA_000238245.1)

This assembly-unit does not have any assembled chromosomes or linkage groups. Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
All1,555,444,3142,962,3651,555,444,31466500
MoleculeTotal
Length
Mitochondrion MT16,724
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