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ASM23616v1

Organism name:
Fluoribacter dumoffii NY 23 (g-proteobacteria)
Infraspecific name:
Strain: NY 23
BioSample:
SAMN02469353
BioProject:
PRJNA74015
Submitter:
Beijing Genomics Institute
Date:
2011/11/29
Assembly type:
na
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000236165.1 (latest)
RefSeq assembly accession:
GCF_000236165.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AGVU01
Assembly method:
SOAPdenovo v. 1.06
Genome coverage:
152x
Sequencing technology:
Illumina Hiseq 2000

IDs: 648298 [UID] 317828 [GenBank] 648298 [RefSeq]

See Genome Information for Fluoribacter dumoffii

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Source DNA is available from State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, P. R. China. Bacteria available from ATCC (ATCC 33279).

Global statistics

Total sequence length3,909,670
Total ungapped length3,894,641
Gaps between scaffolds0
Number of scaffolds3
Scaffold N503,689,573
Scaffold L501
Number of contigs32
Contig N50318,042
Contig L504
Total number of chromosomes and plasmids3
Number of component sequences (WGS or clone)32

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000236175.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CM001373.1=NZ_CM001373.1
Plasmid pLDNY1CM001374.1=NZ_CM001374.1
Plasmid pLDNY2CM001375.1=NZ_CM001375.1

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All3,909,67033,894,6413,689,573290
Chromosome 3,689,57313,682,4253,689,573240
Plasmid pLDNY181,759181,74981,75910
Plasmid pLDNY2138,3381130,467138,33840
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