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canSat3

Organism name:
Cannabis sativa (hemp)
Infraspecific name:
Strain: Purple Kush
BioSample:
SAMN02981385
BioProject:
PRJNA73819
Submitter:
University of Toronto
Date:
2011/10/18
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000230575.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AGQN01
Assembly method:
SOAPdenovo v. 1.0.5
Genome coverage:
130x
Sequencing technology:
Illumina GA II; HiSeq

IDs: 310728 [UID] 310728 [GenBank]

See Genome Information for Cannabis sativa

There are 5 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length757,438,891
Total assembly gap length226,826,481
Gaps between scaffolds0
Number of scaffolds135,164
Scaffold N5016,337
Scaffold L5010,899
Number of contigs337,115
Contig N502,893
Contig L5048,146
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)337,115

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced757,438,891135,164530,612,41016,337201,9510
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