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v1.0

Organism name:
Melampsora larici-populina 98AG31 (rust fungi)
Infraspecific name:
Strain: 98AG31
BioSample:
SAMN02744053
BioProject:
PRJNA46711
Submitter:
US DOE Joint Genome Institute (JGI-PGF)
Date:
2011/04/13
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000204055.1 (latest)
RefSeq assembly accession:
GCF_000204055.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AECX01
Assembly method:
JAZZ v. 1/23/2007
Genome coverage:
8.4x
Sequencing technology:
Sanger

IDs: 266578 [UID] 266578 [GenBank] 976548 [RefSeq]

See Genome Information for Melampsora larici-populina

History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov/Melampsora
JGI Project ID: 4002687
The Organism and DNA are available from Sebastien Duplessis (duplessi@nancy.inra.fr)
Contacts: Sebastien Duplessis (duplessi@nancy.inra.fr)
 Francis Martin (fmartin@nancy.inra.fr)
 Igor Grigoriev (ivgrigoriev@lbl.gov)
Assembly and annotation done by JGI.

Global statistics

Total sequence length101,129,028
Total ungapped length97,682,699
Gaps between scaffolds0
Number of scaffolds462
Scaffold N501,146,214
Scaffold L5027
Number of contigs3,254
Contig N50112,314
Contig L50265
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)3,254

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced101,129,02846297,682,6991,146,2142,7920
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