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ASM20387v1

  • Record removed. This version of the assembly has been suppressed.
Organism name:
Cupriavidus pinatubonensis JMP134 (b-proteobacteria)
Infraspecific name:
Strain: JMP134
BioSample:
SAMN02598255
BioProject:
PRJNA10646
Submitter:
DOE Joint Genome Institute
Date:
2005/08/10
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000203875.1 (suppressed)
RefSeq assembly accession:
GCF_000203875.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 276388 [UID] 265648 [GenBank] 276388 [RefSeq]

See Genome Information for Cupriavidus pinatubonensis

There are 3 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov
Source DNA and bacteria available from Bernardo Gonzalez (bgonzale@genes.bio.puc.cl)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-PGF
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to ... close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.  more

Global statistics

Total sequence length7,255,290
Total ungapped length7,255,290
Total number of chromosomes and plasmids4

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_000203885.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP000090.1=NC_007347.1
Chromosome 2CP000091.1=NC_007348.1
Plasmid megaplasmidCP000092.1=NC_007336.1
Plasmid 1CP000093.1=NC_007337.1

Assembly statistics

MoleculeTotal
Length
All7,255,290
Chromosome 13,806,533
Chromosome 22,726,152
Plasmid megaplasmid634,917
Chromosome 187,688
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