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ASM19288v1

Organism name:
Brucella melitensis M5-90 (a-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: M5-90
BioSample:
SAMN02603654
BioProject:
PRJNA42891
Submitter:
National Key Laboratory of Veterinary Biotechnology , Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences
Date:
2011/03/22
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000192885.1 (latest)
RefSeq assembly accession:
GCF_000192885.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 370338 [UID] 250528 [GenBank] 370338 [RefSeq]

See Genome Information for Brucella melitensis

Pathogen Detection Resources

There are 614 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::03/24/2023 12:23:51
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.4
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,220
CDSs (total)::3,152
Genes (coding)::2,975
CDSs (with protein)::2,975
Genes (RNA)::68
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::55
ncRNAs::4
Pseudo Genes (total)::177
CDSs (without protein)::177
Pseudo Genes (ambiguous residues)::0 of 177
Pseudo Genes (frameshifted)::124 of 177
Pseudo Genes (incomplete)::30 of 177
Pseudo Genes (internal stop)::42 of 177
Pseudo Genes (multiple problems)::18 of 177
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,312,229
Total ungapped length3,312,229
Total number of chromosomes and plasmids2

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Assembly Information

Related Information

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000192895.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome ICP001851.1=NC_017246.1
Chromosome IICP001852.1=NC_017247.1

Assembly statistics

MoleculeTotal
Length
All3,312,229
Chromosome I2,126,451
Chromosome II1,185,778

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Brucella melitensis M5-90Brucella melitensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000250795.2Brucella melitensis bv. 1 str. 16Msuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000250795.2Brucella melitensissuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.0899.96
Best-match type99.9999.0899.96

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna