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ASM18366v1

Organism name:
Candidatus Liberibacter solanacearum CLso-ZC1 (a-proteobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: CLso-ZC1
BioSample:
SAMN02604277
BioProject:
PRJNA39273
Submitter:
USDA, ARS
Date:
2010/12/03
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000183665.1 (latest)
RefSeq assembly accession:
GCF_000183665.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 275668 [UID] 236438 [GenBank] 275668 [RefSeq]

See Genome Information for Candidatus Liberibacter solanacearum

Pathogen Detection Resources

There are 8 assemblies for this organism

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History (Show revision history)

Comment

Genome was manually curated based on annotation generated by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/13/2020 22:02:57
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::4.11
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::1,145
CDSs (total)::1,088
Genes (coding)::1,020
CDSs (with protein)::1,020
Genes (RNA)::57
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::45
ncRNAs::3
Pseudo Genes (total)::68
CDSs (without protein)::68
Pseudo Genes (ambiguous residues)::0 of 68
Pseudo Genes (frameshifted)::52 of 68
Pseudo Genes (incomplete)::16 of 68
Pseudo Genes (internal stop)::8 of 68
Pseudo Genes (multiple problems)::6 of 68
##Genome-Annotation-Data-END##

Global statistics

Total sequence length1,258,278
Total ungapped length1,258,278
Total number of chromosomes and plasmids1

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Assembly Information

Related Information

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000183675.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP002371.1=NC_014774.1

Assembly statistics

MoleculeTotal
Length
Chromosome 1,258,278
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