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ASM18167v2

Organism name:
Bacillus anthracis str. Tsiankovskii-I (firmicutes)
Infraspecific name:
Strain: Tsiankovskii-I
BioSample:
SAMN02436236
Submitter:
J. Craig Venter Institute
Date:
2008/06/16
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000181675.2 (latest)
RefSeq assembly accession:
GCF_000181675.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ABDN02

IDs: 451898 [UID] 451878 [GenBank] 451898 [RefSeq]

See Genome Information for Bacillus anthracis

There are 157 assemblies for this organism

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History (Show revision history)

Comment

B. anthracis Tsiankovskii-I is unique as it contains both of the known virulence plasmids of B. anthracis and produces both capsule and protective antigen. It was successfully used to immunize livestock in the Soviet Union until 1960. The molecular ... basis for its attenuation and success as a vaccine is not understood. Using MLVA, the strain was shown to belong to group A1.a.
Plasmids pXO1 and pXO2 have accession numbers ABDN02000061 and ABDN02000062, respectively. These are draft quality so are not processed as complete plasmids.
In October 2012 contigs ABDN02000053, ABDN02000054, ABDN02000056-ABDN02000058 and ABDN02000060 were suppressed because they may be contaminants.  more

Global statistics

Total sequence length5,504,728
Total assembly gap length0
Gaps between scaffolds0
Number of scaffolds56
Scaffold N50223,714
Scaffold L507
Number of contigs56
Contig N50223,714
Contig L507
Total number of chromosomes and plasmids2

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Global assembly definition

Download the full sequence report
Assembly Unit: Primary Assembly (GCF_000181685.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Plasmid pXO1n/an/an/a1
Plasmid pXO2n/an/an/a1
unplacedn/an/an/a54

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Plasmid pXO1AllAssembled moleculeUnlocalized scaffolds181,7640181,764101181,7640181,764181,7640181,764000000
Plasmid pXO2AllAssembled moleculeUnlocalized scaffolds94,725094,72510194,725094,72594,725094,725000000
unplacedAssembled molecule5,228,239545,228,239267,04800
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