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Lj3.0

Organism name:
Lotus japonicus (eudicots)
Infraspecific name:
Ecotype: MG-20
BioSample:
SAMD00011082
BioProject:
PRJDA28941
Submitter:
Kazusa DNA Research Institute
Date:
2015/09/04
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000181115.2 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
BABK02
Assembly method:
SOAPdenovo v. 1.04; GapCloser v. 1.10; PCAP.rep
Genome coverage:
35x
Sequencing technology:
454 GS FLX Titanium; Illumina Genome Analyzer IIx

IDs: 486051 [UID] 2326098 [GenBank]

See Genome Information for Lotus japonicus

History (Show revision history)

Comment

URL:http://www.kazusa.or.jp/lotus/

Global statistics

Total sequence length394,454,697
Total ungapped length394,454,697
Number of contigs44,464
Contig N5025,054
Contig L502,388
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)44,464

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
All394,454,69744,464394,454,69725,05400
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