Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download
IDs: 317598 [UID] 240898 [GenBank] 317598 [RefSeq]
URL -- http://www.jgi.doe.gov JGI Project ID: 4086861 Source DNA and organism available from Alfons J.M. Stams (Fons.Stams@wur.nl) Contacts: Alfons J.M. Stams (Fons.Stams@wur.nl) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution ... and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ more
##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeqAnnotation Name::GCF_000179015.2-RS_2024_03_27Annotation Date::03/27/2024 01:38:42Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)Annotation Method::Best-placed reference protein set; GeneMarkS-2+Annotation Software revision::6.7Features Annotated::Gene; CDS; rRNA; tRNA; ncRNAGenes (total)::4,719CDSs (total)::4,653Genes (coding)::4,576CDSs (with protein)::4,576Genes (RNA)::66rRNAs::3, 3, 3 (5S, 16S, 23S)complete rRNAs::3, 3, 3 (5S, 16S, 23S)tRNAs::54ncRNAs::3Pseudo Genes (total)::77CDSs (without protein)::77Pseudo Genes (ambiguous residues)::0 of 77Pseudo Genes (frameshifted)::18 of 77Pseudo Genes (incomplete)::63 of 77Pseudo Genes (internal stop)::3 of 77Pseudo Genes (multiple problems)::7 of 77CRISPR Arrays::1##Genome-Annotation-Data-END##
##MIGS-Data-START##investigation_type::bacteria_archaeaproject_name::Alicycliphilus denitrificans BCcollection_date::Missinglat_lon::Missingdepth::Missingalt_elev::Missingcountry::Missingenvironment::Missingnum_replicons::3ref_biomaterial::JCM 14587biotic_relationship::Free livingtrophic_level::Missingrel_to_oxygen::Facultativeisol_growth_condt::Missingsequencing_meth::WGSassembly::Newbler v. 2.2 (pre-release)finishing_strategy::FinishedGOLD Stamp ID::Gi03280Greengenes ID::39244Temperature Range::MesophileGram Staining::Gram-Diseases::None##MIGS-Data-END##
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on