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ASM16735v1

Organism name:
Desulfuromonas acetoxidans DSM 684 (d-proteobacteria)
Infraspecific name:
Strain: DSM 684
BioSample:
SAMN02441806
Submitter:
DOE Joint Genome Institute
Date:
2006/05/12
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000167355.1 (latest)
RefSeq assembly accession:
GCF_000167355.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AAEW02

IDs: 203378 [UID] 203358 [GenBank] 203378 [RefSeq]

See Genome Information for Desulfuromonas acetoxidans

History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov
JGI Project ID: 4000892
Source DNA available from Derek Lovley (dlovley@bio.umass.edu)
Bacteria available from DSMZ: DSM 684
Contacts: Derek Lovley (dlovley@bio.umass.edu)
 Paul Richardson (microbes@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Annotation by JGI-ORNL
The JGI and collaborators endorse the principles for ... the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)
Additional Notes: This project is being designated as "Permanent Draft". The assembly consists of 51 contigs. No further work on this project is planned at this time.  more

Global statistics

Total sequence length3,828,328
Total assembly gap length16
Gaps between scaffolds0
Number of scaffolds51
Scaffold N50195,317
Scaffold L508
Number of contigs52
Contig N50195,317
Contig L508
Total number of chromosomes and plasmids0

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,828,328513,828,312195,31710
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