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ASM15117v1

Organism name:
Trichophyton equinum CBS 127.97 (ascomycete fungi)
Infraspecific name:
Strain: CBS 127.97
BioSample:
SAMN02953737
BioProject:
PRJNA20577
Submitter:
Broad Institute
Date:
2008/10/22
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000151175.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
ABWI01
Genome coverage:
4.88x (4.42x Q>20)
Sequencing technology:
Sanger ABI

IDs: 174488 [UID] 174488 [GenBank]

See Genome Information for Trichophyton equinum

History (Show revision history)

Comment

Annotation was added to the scaffolds in March 2011

Global statistics

Total sequence length24,158,205
Total ungapped length23,476,915
Gaps between scaffolds0
Number of scaffolds125
Scaffold N50397,011
Scaffold L5022
Number of contigs1,716
Contig N5026,788
Contig L50255
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,716

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced24,132,12712323,450,837397,0111,5910
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds26,078026,07820226,078026,07824,101024,101000000
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