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HarSal_1.0

Organism name:
Harpegnathos saltator (Jerdon's jumping ant)
Infraspecific name:
Strain: R22 G/1
BioSample:
SAMN00016742
BioProject:
PRJNA50203
Submitter:
BGI-Shenzhen, Shenzhen 518083, China
Date:
2010/09/17
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000147195.1 (latest)
RefSeq assembly accession:
GCF_000147195.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AEAC01
Assembly method:
SOAPdenovo v. 1.0
Genome coverage:
100x
Sequencing technology:
Illumina GA

IDs: 170698 [UID] 170698 [GenBank] 1497638 [RefSeq]

See Genome Information for Harpegnathos saltator

There are 2 assemblies for this organism

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History (Show revision history)

Comment

These Harpegnathos saltator ants were originally collected as a gamergate colony in Karnataka, India in 1999 and since then have been maintained and bred in the laboratory for over 10 years. This is colony 49, strain R22 G/1.

Global statistics

Total sequence length294,465,601
Total ungapped length283,007,741
Gaps between scaffolds0
Number of scaffolds8,893
Scaffold N50601,965
Scaffold L50144
Number of contigs26,840
Contig N5038,321
Contig L502,030
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)26,840

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced294,465,6018,893283,007,741601,96517,9470
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