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Source database (GenBank or RefSeq) File type

ASM14376v1

Organism name:: Sphingobacterium spiritivorum ATCC 33861 (CFB group bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: ATCC 33861
BioSample:: SAMN00001488
BioProject:: PRJNA31531
Submitter:: BCM
Date:: 2010/07/22
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_000143765.1 (latest)
RefSeq assembly accession:: GCF_000143765.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: ACHA02
Assembly method:: Newbler Assembler v. 2.3-10192009
Genome coverage:: 23x
Sequencing technology:: 454

IDs: 236238 [UID] 232158 [GenBank] 236238 [RefSeq]

See Genome Information for Sphingobacterium spiritivorum

Pathogen Detection Resources

There are 9 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000143765.1	=	GCF_000143765.1	ASM14376v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Sphingobacterium spiritivorum ATCC 33861

 Strain source, body site: urogenital tract

 This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC. Source DNA provided by American Type Culture Collection (ATCC33861). ... Funded by "Genomes and Genetics at BCM-HGSC" (U54 HG003273).
Product names were updated in June 2013  more

Global statistics

Total sequence length	5,093,512
Total ungapped length	5,091,512
Gaps between scaffolds	0
Number of scaffolds	11
Scaffold N50	1,019,525
Scaffold L50	2
Number of contigs	15
Contig N50	894,402
Contig L50	3
Total number of chromosomes and plasmids	1
Number of component sequences (WGS or clone)	15

	ANI	Query coverage	Subject coverage
Declared type	99.99	100.00	99.09
Best-match type	99.99	100.00	99.09

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ASM14376v1

See Genome Information for Sphingobacterium spiritivorum

Pathogen Detection Resources

There are 9 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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