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Source database (GenBank or RefSeq) File type

ASM7248v1

Organism name:: Stenotrophomonas maltophilia K279a (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: K279a
BioSample:: SAMEA1705934
BioProject:: PRJNA30351
Submitter:: Wellcome Trust Sanger Institute
Date:: 2008/06/10
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_000072485.1 (latest)
RefSeq assembly accession:: GCF_000072485.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes

IDs: 91088 [UID] 353988 [GenBank] 91088 [RefSeq]

See Genome Information for Stenotrophomonas maltophilia

Pathogen Detection Resources

There are 1232 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000072485.1	=	GCF_000072485.1	ASM7248v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::12/30/2022 01:18:14
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.4
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,507
CDSs (total)::4,417
Genes (coding)::4,386
CDSs (with protein)::4,386
Genes (RNA)::90
rRNAs::4, 4, 4 (5S, 16S, 23S)
complete rRNAs::4, 4, 4 (5S, 16S, 23S)
tRNAs::74
ncRNAs::4
Pseudo Genes (total)::31
CDSs (without protein)::31
Pseudo Genes (ambiguous residues)::0 of 31
Pseudo Genes (frameshifted)::11 of 31
Pseudo Genes (incomplete)::23 of 31
Pseudo Genes (internal stop)::6 of 31
Pseudo Genes (multiple problems)::8 of 31
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	4,851,126
Total ungapped length	4,851,126
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	97.90	89.14	88.59
Best-match type	97.90	89.14	88.59

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ASM7248v1

See Genome Information for Stenotrophomonas maltophilia

Pathogen Detection Resources

There are 1232 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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