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ASM2664v1

Organism name:
Pseudomonas aeruginosa LESB58 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: LESB58
BioSample:
SAMEA1705916
BioProject:
PRJEA31101
Submitter:
Wellcome Trust Sanger Institute
Date:
2008/12/24
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000026645.1 (latest)
RefSeq assembly accession:
GCF_000026645.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 45568 [UID] 27448 [GenBank] 45568 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

There are 30766 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/17/2024 01:47:46
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::6,189
CDSs (total)::6,105
Genes (coding)::6,055
CDSs (with protein)::6,055
Genes (RNA)::84
rRNAs::4, 4, 4 (5S, 16S, 23S)
complete rRNAs::4, 4, 4 (5S, 16S, 23S)
tRNAs::67
ncRNAs::5
Pseudo Genes (total)::50
CDSs (without protein)::50
Pseudo Genes (ambiguous residues)::0 of 50
Pseudo Genes (frameshifted)::20 of 50
Pseudo Genes (incomplete)::28 of 50
Pseudo Genes (internal stop)::8 of 50
Pseudo Genes (multiple problems)::5 of 50
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length6,601,757
Total ungapped length6,601,757
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000026655.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome FM209186.1=NC_011770.1

Assembly statistics

MoleculeTotal
Length
Chromosome 6,601,757

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Pseudomonas aeruginosa LESB58Pseudomonas aeruginosa

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022496575.1Pseudomonas aeruginosatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022496575.1Pseudomonas aeruginosatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.5091.5397.31
Best-match type99.5091.5397.31

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna