U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM952v1

Organism name:
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Serovar: Gallinarum
Infraspecific name:
Strain: 287/91
BioSample:
SAMEA1705927
BioProject:
PRJEA30689
Submitter:
Wellcome Trust Sanger Institute
Date:
2008/09/18
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000009525.1 (latest)
RefSeq assembly accession:
GCF_000009525.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 31068 [UID] 10328 [GenBank] 31068 [RefSeq]

See Genome Information for Salmonella enterica

There are 534421 assemblies for this organism

See more

History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/11/2024 01:02:42
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,508
CDSs (total)::4,399
Genes (coding)::4,056
CDSs (with protein)::4,056
Genes (RNA)::109
rRNAs::8, 7, 7 (5S, 16S, 23S)
complete rRNAs::8, 7, 7 (5S, 16S, 23S)
tRNAs::75
ncRNAs::12
Pseudo Genes (total)::343
CDSs (without protein)::343
Pseudo Genes (ambiguous residues)::0 of 343
Pseudo Genes (frameshifted)::187 of 343
Pseudo Genes (incomplete)::104 of 343
Pseudo Genes (internal stop)::103 of 343
Pseudo Genes (multiple problems)::44 of 343
Pseudo Genes (short protein)::1 of 343
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,658,697
Total ungapped length4,658,697
Total number of chromosomes and plasmids1

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000009535.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome AM933173.1=NC_011274.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,658,697

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Salmonella enterica

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_006365335.1Salmonella entericatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_006365335.1Salmonella entericatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9095.1289.44
Best-match type98.9095.1289.44

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna