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ASM848v1

Organism name:
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: Philadelphia 1
BioSample:
SAMN02603156
BioProject:
PRJNA22
Submitter:
Columbia Genome Center
Date:
2004/09/24
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000008485.1 (latest)
RefSeq assembly accession:
GCF_000008485.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 30068 [UID] 9288 [GenBank] 30068 [RefSeq]

See Genome Information for Legionella pneumophila

There are 3076 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::04/04/2020 07:24:08
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::4.11
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::3,052
CDSs (total)::2,995
Genes (coding)::2,963
CDSs (with protein)::2,963
Genes (RNA)::57
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::44
ncRNAs::4
Pseudo Genes (total)::32
CDSs (without protein)::32
Pseudo Genes (ambiguous residues)::0 of 32
Pseudo Genes (frameshifted)::19 of 32
Pseudo Genes (incomplete)::15 of 32
Pseudo Genes (internal stop)::7 of 32
Pseudo Genes (multiple problems)::8 of 32
##Genome-Annotation-Data-END##

Global statistics

Total sequence length3,397,754
Total ungapped length3,397,754
Total number of chromosomes and plasmids1

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PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000008495.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome AE017354.1=NC_002942.5

Assembly statistics

MoleculeTotal
Length
Chromosome 3,397,754
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