U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

ASM285v2

Organism name:
Aspergillus niger CBS 513.88 (ascomycete fungi)
BioSample:
SAMEA3283178
BioProject:
PRJNA19275
Submitter:
DSM, The Netherlands
Date:
2007/04/11
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000002855.2 (latest)
RefSeq assembly accession:
GCF_000002855.3 (latest)
RefSeq assembly and GenBank assembly identical:
yes

IDs: 80501 [UID] 857898 [GenBank] 974648 [RefSeq]

See Genome Information for Aspergillus niger

There are 110 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length34,006,671
Total ungapped length33,961,703
Gaps between scaffolds0
Number of scaffolds20
Scaffold N502,525,243
Scaffold L506
Number of contigs470
Contig N50114,002
Contig L5096
Total number of chromosomes and plasmids9
Number of component sequences (WGS or clone)469

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_000001045.3)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome In/an/an/a2
Chromosome IIn/an/an/a2
Chromosome IIIn/an/an/a2
Chromosome IVn/an/an/a3
Chromosome Vn/an/an/a3
Chromosome VIn/an/an/a2
Chromosome VIIn/an/an/a2
Chromosome VIIIn/an/an/a3

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
AllAssembled molecule33,975,5681933,930,6002,525,2434500
Chromosome IAllAssembled moleculeUnlocalized scaffolds3,329,27503,329,2752023,325,37503,325,3751,734,20901,734,20939039000
Chromosome IIAllAssembled moleculeUnlocalized scaffolds4,534,45604,534,4562024,528,45604,528,4563,625,81303,625,81360060000
Chromosome IIIAllAssembled moleculeUnlocalized scaffolds4,446,55804,446,5582024,440,55804,440,5582,566,73802,566,73860060000
Chromosome IVAllAssembled moleculeUnlocalized scaffolds6,063,92306,063,9233036,055,82306,055,8233,626,08503,626,08581081000
Chromosome VAllAssembled moleculeUnlocalized scaffolds2,990,62002,990,6203032,986,22002,986,2202,132,68802,132,68844044000
Chromosome VIAllAssembled moleculeUnlocalized scaffolds4,135,05404,135,0542024,129,35404,129,3542,525,24302,525,24357057000
Chromosome VIIAllAssembled moleculeUnlocalized scaffolds3,324,67103,324,6712023,320,20303,320,2032,721,46702,721,46745045000
Chromosome VIIIAllAssembled moleculeUnlocalized scaffolds5,151,01105,151,0113035,144,61105,144,6112,925,08002,925,08064064000
MoleculeTotal
Length
Mitochondrion MT31,103
Support Center