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Stehi1

Organism name:
Stereum hirsutum FP-91666 SS1 (basidiomycete fungi)
Infraspecific name:
Strain: FP-91666 SS1
BioSample:
SAMN02981277
BioProject:
PRJNA52843
Submitter:
JGI
Date:
2012/06/04
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000264905.1 (latest)
RefSeq assembly accession:
GCF_000264905.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AEGX01
Assembly method:
Newbler v. 2.5
Genome coverage:
45x
Sequencing technology:
Sanger; 454; Illumina

IDs: 383398 [UID] 383398 [GenBank] 1017938 [RefSeq]

See Genome Information for Stereum hirsutum

History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/Stehi1
JGI Project ID: 52843
The DNA was provided by Dimitrios Floudas(dfloudas@clarku.edu)
The strain is available from USDA Forest Products Laboratory
Contacts: David S. Hibbett (dhibbett@clarku.edu)
Assembly and annotation done by JGI.
The JGI and collaborators endorse the principles for the distribution and ... use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length46,511,623
Total ungapped length45,647,489
Gaps between scaffolds0
Number of scaffolds159
Scaffold N501,799,000
Scaffold L509
Number of contigs669
Contig N50245,271
Contig L5054
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)669

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced46,511,62315945,647,4891,799,0005100