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Yamagata, H. is at School of Life Science, Tokyo University of Pharmacy and Life Science. Yoshikawa, H. is at Department of Bioscience, Faculty of Applied Bioscience, Tokyo University of Agriculture. Udaka, S. is at Department of Fermentation Science, Faculty ... of Applied Bioscience, Tokyo University of Agriculture. The other authors are at NITE Genome Analysis Center (NGAC), Department of Biotechnology, National Institute of Technology and Evaluation (NITE).

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URL:http://www.bio.nite.go.jp/

DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps and the genomic and proteomic data of the microorganisms analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top

The microbial strain and microbial genomic DNA clones used for the sequencing project are available through the NBRC. URL:http://www.nbrc.nite.go.jp/e/index.html
The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/11/2024 01:16:26
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::6,023
CDSs (total)::5,847
Genes (coding)::5,795
CDSs (with protein)::5,795
Genes (RNA)::176
rRNAs::14, 15, 15 (5S, 16S, 23S)
complete rRNAs::14, 15, 15 (5S, 16S, 23S)
tRNAs::127
ncRNAs::5
Pseudo Genes (total)::52
CDSs (without protein)::52
Pseudo Genes (ambiguous residues)::0 of 52
Pseudo Genes (frameshifted)::16 of 52
Pseudo Genes (incomplete)::44 of 52
Pseudo Genes (internal stop)::4 of 52
Pseudo Genes (multiple problems)::11 of 52
##Genome-Annotation-Data-END##

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