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ASM2864195v1

Organism name:
Protonibea diacanthus (bony fishes)
Isolate:
BC1
Sex:
male
BioSample:
SAMN14179945
BioProject:
PRJNA608639
Submitter:
Shanghai Ocean University
Date:
2023/02/22
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_028641955.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAATJX01
Assembly method:
SOAPdenovo v. December-2019
Expected final version:
yes
Genome coverage:
887.8x
Sequencing technology:
Oxford Nanopore GridION; BGI-Seq 500

IDs: 15960131 [UID] 40976768 [GenBank]

See Genome Information for Protonibea diacanthus

History (Show revision history)

Comment

Global statistics

Total sequence length635,688,566
Total ungapped length632,961,798
Gaps between scaffolds0
Number of scaffolds19,703
Scaffold N5025,603,171
Scaffold L5012
Number of contigs20,389
Contig N504,776,643
Contig L5038
Total number of chromosomes and plasmids24
Number of component sequences (WGS or clone)19,703

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_028646415.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM053976.1n/an/a0
Chromosome 2CM053977.1n/an/a0
Chromosome 3CM053978.1n/an/a0
Chromosome 4CM053979.1n/an/a0
Chromosome 5CM053980.1n/an/a0
Chromosome 6CM053981.1n/an/a0
Chromosome 7CM053982.1n/an/a0
Chromosome 8CM053983.1n/an/a0
Chromosome 9CM053984.1n/an/a0
Chromosome 10CM053985.1n/an/a0
Chromosome 11CM053986.1n/an/a0
Chromosome 12CM053987.1n/an/a0
Chromosome 13CM053988.1n/an/a0
Chromosome 14CM053989.1n/an/a0
Chromosome 15CM053990.1n/an/a0
Chromosome 16CM053991.1n/an/a0
Chromosome 17CM053992.1n/an/a0
Chromosome 18CM053993.1n/an/a0
Chromosome 19CM053994.1n/an/a0
Chromosome 20CM053995.1n/an/a0
Chromosome 21CM053996.1n/an/a0
Chromosome 22CM053997.1n/an/a0
Chromosome 23CM053998.1n/an/a0
Chromosome 24CM053999.1n/an/a0
unplacedn/an/an/a19,679

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All635,688,56619,703632,961,79825,603,1716860
Chromosome 132,491,028132,315,79032,491,028320
Chromosome 230,044,345129,893,60730,044,345240
Chromosome 329,287,250129,249,33629,287,250210
Chromosome 428,455,452128,407,88728,455,452220
Chromosome 528,354,148128,015,56028,354,148670
Chromosome 627,686,935127,650,42427,686,935230
Chromosome 727,622,612127,435,25927,622,612290
Chromosome 827,071,934126,860,18227,071,934170
Chromosome 926,848,878126,785,97426,848,878270
Chromosome 1026,838,654126,765,41726,838,654100
Chromosome 1126,833,233126,689,70326,833,233200
Chromosome 1225,603,171125,578,55225,603,171400
Chromosome 1325,186,542125,061,37025,186,542130
Chromosome 1425,061,528124,934,22825,061,528140
Chromosome 1524,704,899124,586,69124,704,89980
Chromosome 1623,025,780122,953,06423,025,780130
Chromosome 1722,995,779122,978,42222,995,77970
Chromosome 1822,879,224122,805,27522,879,224120
Chromosome 1922,814,890122,566,31522,814,890150
Chromosome 2021,999,825121,820,05821,999,825200
Chromosome 2121,881,350121,821,85721,881,35090
Chromosome 2219,646,186119,551,93119,646,186130
Chromosome 2317,822,282117,784,72417,822,282210
Chromosome 2413,348,899113,328,56013,348,89970
unplaced37,183,74219,67937,121,6124,9722020