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Source database (GenBank or RefSeq) File type

Myco_tube_MD15584_V1

Organism name:: Mycobacterium tuberculosis MD15584 (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: MD15584
BioSample:: SAMN02584675
BioProject:: PRJNA234652
Submitter:: Broad Institute
Date:: 2014/04/29
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000651255.1 (latest)
RefSeq assembly accession:: GCF_000651255.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JLDI01
Assembly method:: allpaths v. R48559
Genome coverage:: 86.0x
Sequencing technology:: Illumina

IDs: 158081 [UID] 1027358 [GenBank] 1575038 [RefSeq]

See Genome Information for Mycobacterium tuberculosis

Pathogen Detection Resources

There are 7610 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000651255.1	=	GCF_000651255.1	Myco_tube_MD15584_V1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length	4,426,270
Total ungapped length	4,425,302
Gaps between scaffolds	0
Number of scaffolds	93
Scaffold N50	104,289
Scaffold L50	14
Number of contigs	101
Contig N50	96,618
Contig L50	16
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	101

	ANI	Query coverage	Subject coverage
Declared type	99.94	98.78	99.09
Best-match type	99.94	98.78	99.09

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Myco_tube_MD15584_V1

See Genome Information for Mycobacterium tuberculosis

Pathogen Detection Resources

There are 7610 assemblies for this organism

History (Show revision history)

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Average Nucleotide Identity (ANI) data

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