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Eurhe1

Organism name:
Aspergillus ruber CBS 135680 (ascomycete fungi)
Infraspecific name:
Strain: CBS 135680
BioSample:
SAMN02744096
BioProject:
PRJNA215335
Submitter:
DOE Joint Genome Institute
Date:
2014/03/27
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000600275.1 (latest)
RefSeq assembly accession:
GCF_000600275.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AWRT01
Assembly method:
Allpaths-LG v. R39750
Genome coverage:
39.7x
Sequencing technology:
Illumina

IDs: 143701 [UID] 997698 [GenBank] 26418698 [RefSeq]

See Genome Information for Aspergillus ruber

There are 3 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/Eurhe1
JGI Project ID: 404126
The DNA was provided by Tamar Kis-Papo(kispapo@research.haifa.ac.il)
The strain is available from CBS
Contacts: Tamar Kis-Papo (kispapo@research.haifa.ac.il)
Assembly and annotation done by JGI.
The JGI and collaborators endorse the principles for the distribution and use of large scale ... sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length26,209,327
Total ungapped length26,075,740
Gaps between scaffolds0
Number of scaffolds110
Scaffold N50623,674
Scaffold L5014
Number of contigs371
Contig N50155,194
Contig L5053
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)371

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced26,209,32711026,075,740623,6742610