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Source database (GenBank or RefSeq) File type

Prunus_persica_NCBIv2

Organism name:

Prunus persica (peach)

Infraspecific name:

Cultivar: Lovell

BioSample:

SAMN02981429

BioProject:

PRJNA31227

Submitter:

PGF

Date:

2017/02/02

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_000346465.2 (latest)

RefSeq assembly accession:

GCF_000346465.2 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome Pltd

Data displayed for RefSeq version

WGS Project:

AKXU02

Assembly method:

ARACHNE v. 20071016_modified

Genome coverage:

8.47x

Sequencing technology:

ABI 3739

IDs: 969101 [UID] 4026228 [GenBank] 4168028 [RefSeq]

See Genome Information for Prunus persica

Pathogen Detection Resources

There are 10 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000346465.2	≠	GCF_000346465.2	Prunus_persica_NCBIv2	Chromosome	Latest GenBank, Latest RefSeq
GCA_000346465.1	=	GCF_000346465.1	Prupe1_0	Scaffold	Replaced GenBank, Replaced RefSeq

Comment

Global statistics

Total sequence length	227,569,171
Total ungapped length	224,796,718
Gaps between scaffolds	0
Number of scaffolds	192
Scaffold N50	27,368,013
Scaffold L50	4
Number of contigs	2,531
Contig N50	255,210
Contig L50	251
Total number of chromosomes and plasmids	9
Number of component sequences (WGS or clone)	2,531

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome G1	CM007651.1	=	NC_034009.1	0
Chromosome G2	CM007652.1	=	NC_034010.1	0
Chromosome G3	CM007653.1	=	NC_034011.1	0
Chromosome G4	CM007654.1	=	NC_034012.1	0
Chromosome G5	CM007655.1	=	NC_034013.1	0
Chromosome G6	CM007656.1	=	NC_034014.1	0
Chromosome G7	CM007657.1	=	NC_034015.1	0
Chromosome G8	CM007658.1	=	NC_034016.1	0
unplaced	n/a	n/a	n/a	183

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	227,411,381	191	224,638,928	27,368,013	2,339
Chromosome G1	47,851,208	1	47,417,456	47,851,208	433
Chromosome G2	30,405,870	1	29,985,297	30,405,870	286
Chromosome G3	27,368,013	1	27,022,947	27,368,013	273
Chromosome G4	25,843,236	1	25,549,276	25,843,236	240
Chromosome G5	18,496,696	1	18,295,674	18,496,696	155
Chromosome G6	30,767,194	1	30,423,365	30,767,194	301
Chromosome G7	22,388,614	1	22,053,153	22,388,614	216
Chromosome G8	22,573,980	1	22,392,798	22,573,980	186
unplaced	1,716,570	183	1,498,962	12,175	249

Assembly

Genome Assembly

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Prunus_persica_NCBIv2

See Genome Information for Prunus persica

Pathogen Detection Resources

There are 10 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear