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ASM173614v1

Organism name:
Legionella parisiensis (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 19216
BioSample:
SAMN04495209
BioProject:
PRJNA312141
Submitter:
Goethe University
Date:
2016/09/20
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001736145.1 (latest)
RefSeq assembly accession:
GCF_001736145.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LSOG01
Assembly method:
Celera v. 5.3
Expected final version:
yes
Genome coverage:
80.0x
Sequencing technology:
Roche FLX

IDs: 797661 [UID] 3457908 [GenBank] 3464108 [RefSeq]

See Genome Information for Legionella parisiensis

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length4,232,284
Total ungapped length4,232,284
Number of contigs222
Contig N5065,672
Contig L5020
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)222

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,232,2842224,232,28465,67200

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Legionella parisiensisLegionella parisiensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001467945.1Legionella parisiensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001467945.1Legionella parisiensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9898.3799.85
Best-match type99.9898.3799.85

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna