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ASM30175v1

Organism name:
Acinetobacter lwoffii TG19636 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: TG19636
BioSample:
SAMN02471243
BioProject:
PRJNA172714
Submitter:
Translational Genomics Research Institute
Date:
2012/10/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000301755.1 (latest)
RefSeq assembly accession:
GCF_000301755.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AMJG01
Assembly method:
Velvet v. 1.1.0.4
Genome coverage:
112x
Sequencing technology:
Illumina GA-II

IDs: 622798 [UID] 437268 [GenBank] 622798 [RefSeq]

See Genome Information for Acinetobacter lwoffii

Pathogen Detection Resources

There are 77 assemblies for this organism

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History (Show revision history)

Comment

Source DNA available from Elizabeth Driebe, Translational Genomics Research Institute, 3051 W. Shamrell Blvd., Suite 106, Flagstaff, AZ, 86001

Global statistics

Total sequence length3,497,784
Total ungapped length3,497,784
Number of contigs245
Contig N5041,518
Contig L5029
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)245

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced3,497,7842453,497,78441,51800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acinetobacter lwoffii TG19636Acinetobacter lwoffii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000248355.2Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000248355.2Acinetobacter lwoffiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type96.0880.6384.11
Best-match type96.0880.6384.11

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna