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S.mobaraensisn 1.0

Organism name:
Streptomyces mobaraensis NBRC 13819 = DSM 40847 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: DSM 40847
BioSample:
SAMN02470112
BioProject:
PRJNA188290
Submitter:
Jiangxi Normal University
Date:
2013/02/27
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000342125.1 (latest)
RefSeq assembly accession:
GCF_000342125.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AORZ01
Assembly method:
Velvet v. 1.2.07
Genome coverage:
85.0x
Sequencing technology:
Illumina HiSeq

IDs: 556528 [UID] 552028 [GenBank] 556528 [RefSeq]

See Genome Information for Streptomyces mobaraensis

There are 5 assemblies for this organism

See more

History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be aware that the annotation is done automatically with little or no manual curation.

Global statistics

Total sequence length7,477,811
Total ungapped length7,477,811
Number of contigs266
Contig N5047,194
Contig L5048
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)266

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,477,8112667,477,81147,19400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces mobaraensis NBRC 13819 = DSM 40847Streptomyces mobaraensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_017916255.1Streptomyces mobaraensis NBRC 13819 = DSM 40847type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_017916255.1Streptomyces mobaraensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9899.9498.67
Best-match type99.9899.9498.67

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna