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Library:24917 (dbEST ID)

Organism: | Oreochromis niloticus |

Developmental stage: | adult |

Tissue: | stomach |

normalized

Source: Thomas D. Kocher, University of Maryland

3,232 ESTs from this library were grouped into 2,160 UniGene entries (putative genes) [UniGene build #2, 28-Feb-2011]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs | TPM | UniGene Entry | ||
---|---|---|---|---|

9 | 2785 | Oni.715 | Transcribed locus. | |

9 | 2785 | Oni.4184 | Transcribed locus. | |

8 | 2475 | Oni.43915 | Transcribed locus. | |

8 | 2475 | Oni.3902 | Transcribed locus, weakly similar to XP_692427.1 PREDICTED: glutathione S-transferase theta 1a [Danio rerio]. | |

7 | 2166 | Oni.9072 | Transcribed locus, moderately similar to NP_001002621.1 hypothetical protein LOC436894 [Danio rerio]. | |

7 | 2166 | Oni.5768 | Transcribed locus, moderately similar to NP_001007621.1 pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor [Rattus norvegicus]. | |

7 | 2166 | Oni.3832 | Transcribed locus, strongly similar to NP_001013363.1 RNA-binding protein 8A [Danio rerio]. | |

7 | 2166 | Oni.1342 | Transcribed locus, strongly similar to NP_058977.1 proteasome subunit alpha type-4 [Rattus norvegicus]. | |

7 | 2166 | Oni.1139 | Transcribed locus. | |

6 | 1856 | Oni.939 | UDP-glucuronosyltransferase 1 (UGT). | |

6 | 1856 | Oni.539 | Transcribed locus, strongly similar to NP_990672.1 myosin regulatory light chain 2, smooth muscle minor isoform [Gallus gallus]. | |

6 | 1856 | Oni.4222 | Transcribed locus, moderately similar to NP_001018512.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Danio rerio]. | |

6 | 1856 | Oni.41067 | Transcribed locus. | |

6 | 1856 | Oni.382 | Transcribed locus, strongly similar to NP_001019574.1 cytochrome c oxidase subunit Vaa [Danio rerio]. | |

6 | 1856 | Oni.3171 | Transcribed locus, strongly similar to NP_001019600.1 mitochondrial ATP synthase beta subunit-like [Danio rerio]. | |

6 | 1856 | Oni.2035 | Transcribed locus. | |

6 | 1856 | Oni.1044 | Transcribed locus. | |

5 | 1547 | Oni.9525 | Transcribed locus. | |

5 | 1547 | Oni.8285 | Transcribed locus, strongly similar to NP_571467.2 proteasome subunit beta type-8 [Danio rerio]. | |

5 | 1547 | Oni.5478 | Transcribed locus, strongly similar to NP_001025358.1 proteasome subunit alpha type-3 [Danio rerio]. | |

5 | 1547 | Oni.41072 | Transcribed locus. | |

5 | 1547 | Oni.40913 | Transcribed locus. | |

5 | 1547 | Oni.3090 | Transcribed locus, strongly similar to NP_001004283.1 eukaryotic translation initiation factor 3 subunit D [Rattus norvegicus]. | |

5 | 1547 | Oni.2125 | Transcribed locus, moderately similar to NP_775331.1 epididymal secretory protein E1 precursor [Danio rerio]. | |

5 | 1547 | Oni.20361 | Transcribed locus, weakly similar to XP_002664516.1 PREDICTED: retinoic acid receptor responder (tazarotene induced) 3-like isoform 1 [Danio rerio]. | |

5 | 1547 | Oni.1858 | Glutathione peroxidase. | |

5 | 1547 | Oni.17485 | Transcribed locus. | |

5 | 1547 | Oni.1404 | Transcribed locus, moderately similar to NP_001006038.1 hypothetical protein LOC450017 [Danio rerio]. | |

5 | 1547 | Oni.11521 | Transcribed locus, moderately similar to XP_685621.4 PREDICTED: wu:fc76g05 isoform 1 [Danio rerio]. | |

4 | 1238 | Oni.99 | Transcribed locus. | |

4 | 1238 | Oni.8685 | Transcribed locus, moderately similar to NP_001134117.1 PDZ and LIM domain protein 3 [Salmo salar]. | |

4 | 1238 | Oni.8652 | Transcribed locus, moderately similar to NP_956996.1 ATP synthase subunit d, mitochondrial [Danio rerio]. | |

4 | 1238 | Oni.8218 | Transcribed locus, strongly similar to NP_032973.1 26S protease regulatory subunit 4 [Mus musculus]. | |

4 | 1238 | Oni.8182 | Transcribed locus, moderately similar to XP_001340407.1 PREDICTED: thiosulfate sulfurtransferase KAT-like [Danio rerio]. | |

4 | 1238 | Oni.7913 | Transcribed locus, strongly similar to NP_001002131.1 26S proteasome non-ATPase regulatory subunit 8 [Danio rerio]. | |

4 | 1238 | Oni.7517 | Transcribed locus. | |

4 | 1238 | Oni.7146 | Transcribed locus, strongly similar to NP_956314.1 protein BTG1 [Danio rerio]. | |

4 | 1238 | Oni.7049 | Transcribed locus, moderately similar to NP_001026388.1 growth hormone-inducible transmembrane protein [Gallus gallus]. | |

4 | 1238 | Oni.7030 | Transcribed locus, moderately similar to NP_001025285.1 28S ribosomal protein S18a, mitochondrial [Danio rerio]. | |

4 | 1238 | Oni.6974 | Transcribed locus, strongly similar to NP_001006428.1 charged multivesicular body protein 1b [Gallus gallus]. | |

4 | 1238 | Oni.6787 | Transcribed locus, weakly similar to NP_001135170.1 S100 calcium binding protein V2-like [Salmo salar]. | |

4 | 1238 | Oni.6578 | Transcribed locus. | |

4 | 1238 | Oni.6219 | Transcribed locus, strongly similar to NP_998331.1 proteasome subunit alpha type-7-like [Danio rerio]. | |

4 | 1238 | Oni.6077 | Transcribed locus, moderately similar to NP_006338.1 peptidyl-prolyl cis-trans isomerase H [Homo sapiens]. | |

4 | 1238 | Oni.548 | Transcribed locus, moderately similar to NP_997841.1 glutathione S-transferase M [Danio rerio]. | |

4 | 1238 | Oni.5395 | Transcribed locus, moderately similar to NP_001038338.1 protein QIL1 [Danio rerio]. | |

4 | 1238 | Oni.535 | Transcribed locus, strongly similar to NP_001002068.1 cytochrome c [Danio rerio]. | |

4 | 1238 | Oni.5330 | Transcribed locus, strongly similar to XP_486217.2 PREDICTED: NHP2-like protein 1-like [Mus musculus]. | |

4 | 1238 | Oni.502 | Transcribed locus, weakly similar to NP_001154031.1 Glutathione S-transferase A [Oncorhynchus mykiss]. | |

4 | 1238 | Oni.4958 | Transcribed locus. | |

4 | 1238 | Oni.46 | Transcribed locus, strongly similar to NP_058856.1 40S ribosomal protein S6 [Rattus norvegicus]. | |

4 | 1238 | Oni.44580 | Transcribed locus, moderately similar to NP_001018600.1 hypothetical protein LOC553802 [Danio rerio]. | |

4 | 1238 | Oni.4448 | Transcribed locus, moderately similar to NP_001035133.1 Leydig cell tumor 10 kDa protein [Danio rerio]. | |

4 | 1238 | Oni.4436 | Transcribed locus, moderately similar to XP_002666556.1 PREDICTED: hypothetical protein LOC335550 isoform 1 [Danio rerio]. | |

4 | 1238 | Oni.44230 | Transcribed locus. | |

4 | 1238 | Oni.44225 | Transcribed locus, strongly similar to NP_956060.1 alpha-soluble NSF attachment protein [Danio rerio]. | |

4 | 1238 | Oni.44174 | Transcribed locus, strongly similar to NP_001002155.1 ribosomal protein L21 [Danio rerio]. | |

4 | 1238 | Oni.44078 | Transcribed locus. | |

4 | 1238 | Oni.43941 | Transcribed locus, moderately similar to NP_001092200.1 prothymosin alpha-B [Danio rerio]. | |

4 | 1238 | Oni.43910 | Transcribed locus, weakly similar to NP_998559.1 glutathione S-transferase, alpha-like [Danio rerio]. | |

4 | 1238 | Oni.43875 | Transcribed locus, moderately similar to NP_956800.1 hypothetical protein LOC393478 [Danio rerio]. | |

4 | 1238 | Oni.43870 | Transcribed locus, moderately similar to NP_001154031.1 Glutathione S-transferase A [Oncorhynchus mykiss]. | |

4 | 1238 | Oni.41498 | Transcribed locus. | |

4 | 1238 | Oni.41462 | Transcribed locus. | |

4 | 1238 | Oni.41448 | Transcribed locus. | |

4 | 1238 | Oni.41447 | Transcribed locus. | |

4 | 1238 | Oni.40689 | Transcribed locus, weakly similar to NP_001117668.1 rhamnose binding lectin STL2 [Oncorhynchus mykiss]. | |

4 | 1238 | Oni.3918 | Transcribed locus. | |

4 | 1238 | Oni.39 | Transcribed locus, strongly similar to NP_001116390.1 collagen type I alpha 1 [Oryzias latipes]. | |

4 | 1238 | Oni.3812 | Transcribed locus, strongly similar to NP_077779.2 calcineurin subunit B type 1 [Mus musculus]. | |

4 | 1238 | Oni.3711 | Transcribed locus, moderately similar to NP_114021.2 nucleoside diphosphate kinase B [Rattus norvegicus]. | |

4 | 1238 | Oni.3679 | Transcribed locus, strongly similar to NP_957048.1 heat shock factor binding protein 1 [Danio rerio]. | |

4 | 1238 | Oni.3416 | Transcribed locus, weakly similar to NP_001027900.1 cytochrome c oxidase, subunit VIIa 2 [Danio rerio]. | |

4 | 1238 | Oni.3214 | Transcribed locus, weakly similar to XP_002196146.1 PREDICTED: hypothetical protein [Taeniopygia guttata]. | |

4 | 1238 | Oni.32024 | Transcribed locus. | |

4 | 1238 | Oni.32022 | Transcribed locus, moderately similar to NP_001156635.1 cytochrome P450 2P3 [Oryzias latipes]. | |

4 | 1238 | Oni.3001 | Transcribed locus, moderately similar to NP_775370.1 elongation factor 1-gamma [Danio rerio]. | |

4 | 1238 | Oni.2958 | Transcribed locus, strongly similar to NP_001020709.1 tetraspanin 3 [Danio rerio]. | |

4 | 1238 | Oni.29063 | Transcribed locus, weakly similar to NP_001003875.1 U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]. | |

4 | 1238 | Oni.2858 | Transcribed locus, moderately similar to NP_001004682.1 fatty acid binding protein 11a [Danio rerio]. | |

4 | 1238 | Oni.2758 | Transcribed locus, strongly similar to NP_957293.1 eukaryotic translation initiation factor 3 subunit G [Danio rerio]. | |

4 | 1238 | Oni.2568 | Transcribed locus. | |

4 | 1238 | Oni.2327 | Transcribed locus, strongly similar to NP_055580.1 mitochondrial import receptor subunit TOM20 homolog [Homo sapiens]. | |

4 | 1238 | Oni.2256 | Transcribed locus, moderately similar to NP_001186938.1 eukaryotic translation initiation factor 3, subunit F-like [Danio rerio]. | |

4 | 1238 | Oni.22055 | Transcribed locus, moderately similar to XP_693825.2 PREDICTED: hypothetical protein [Danio rerio]. | |

4 | 1238 | Oni.21799 | Transcribed locus, weakly similar to XP_002661011.1 PREDICTED: C-C motif chemokine 21-like [Danio rerio]. | |

4 | 1238 | Oni.21753 | Transcribed locus. | |

4 | 1238 | Oni.21554 | Transcribed locus. | |

4 | 1238 | Oni.19499 | Transcribed locus, moderately similar to XP_693745.1 PREDICTED: putative transmembrane protein TA-2-like [Danio rerio]. | |

4 | 1238 | Oni.18201 | Transcribed locus, weakly similar to NP_989907.1 acyl-CoA-binding protein [Gallus gallus]. | |

4 | 1238 | Oni.17721 | Transcribed locus, weakly similar to NP_001138713.1 rapunzel2 [Danio rerio]. | |

4 | 1238 | Oni.1702 | Nascent polypeptide-associated complex alpha polypeptide (naca). | |

4 | 1238 | Oni.17 | Transcribed locus, strongly similar to NP_001007480.1 60S ribosomal protein L4 [Gallus gallus]. | |

4 | 1238 | Oni.15452 | Transcribed locus. | |

4 | 1238 | Oni.1412 | Transcribed locus, moderately similar to XP_002663033.1 PREDICTED: anterior gradient 2 homolog [Danio rerio]. | |

4 | 1238 | Oni.13452 | Transcribed locus. | |

4 | 1238 | Oni.11083 | Transcribed locus, moderately similar to NP_919348.3 fructose-bisphosphate aldolase B [Danio rerio]. | |

4 | 1238 | Oni.1102 | Transcribed locus. | |

3 | 928 | Oni.9918 | Transcribed locus, moderately similar to NP_001133346.1 Small VCP/p97-interacting protein [Salmo salar]. | |

3 | 928 | Oni.9774 | Transcribed locus. |

Source: NCBI UniGene

4,498 EST sequences from this library have been submitted to the public sequence database as of 28-Feb-2011.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

An EST resource for tilapia based on 17 normalized libraries and assembly of 116,899 sequence tags. Lee BY, et al., BMC Genomics 11, 278 (2010).