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An organized view of the transcripome



Library:18520 (dbEST ID)

THYMU3

Library Description

Organism:Homo sapiens
Tissue:thymus
Vector:pME18SFL3

Source: Takao Isogai, Helix Research Institute

Gene Content Analysis

36,691 ESTs from this library were grouped into 7,919 UniGene entries (putative genes) [UniGene build #236, 09-Mar-2013]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs TPM   UniGene Entry
10 273 Hs.351335 Transmembrane protein 143.
10 273 Hs.334885 GTP binding protein 3 (mitochondrial).
10 273 Hs.323363 Autophagy related 9A.
10 273 Hs.301696 Family with sequence similarity 214, member B.
10 273 Hs.289052 BCL2-like 12 (proline rich).
10 273 Hs.287735 Tripartite motif containing 46.
10 273 Hs.285354 MYC associated factor X.
10 273 Hs.272927 Sec23 homolog A (S. cerevisiae).
10 273 Hs.270084 Neural precursor cell expressed, developmentally down-regulated 1.
10 273 Hs.268326 C-type lectin domain family 2, member D.
10 273 Hs.243564 CD48 molecule.
10 273 Hs.235095 Chromosome 1 open reading frame 159.
10 273 Hs.224616 ER degradation enhancer, mannosidase alpha-like 1.
10 273 Hs.22065 CDC42 small effector 1.
10 273 Hs.211463 Dynamin 2.
10 273 Hs.200943 NMDA receptor regulated 2.
10 273 Hs.198241 Amine oxidase, copper containing 3 (vascular adhesion protein 1).
10 273 Hs.191518 DEAH (Asp-Glu-Ala-His) box polypeptide 9.
10 273 Hs.162121 Coatomer protein complex, subunit alpha.
10 273 Hs.159014 PRP4 pre-mRNA processing factor 4 homolog B (yeast).
10 273 Hs.153022 TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa.
10 273 Hs.149185 CNDP dipeptidase 2 (metallopeptidase M20 family).
10 273 Hs.148656 Glucuronidase, beta pseudogene 11.
10 273 Hs.136905 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase.
10 273 Hs.133512 Zinc finger CCCH-type, antiviral 1.
10 273 Hs.11355 Thymopoietin.
10 273 Hs.112444 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa.
10 273 Hs.110702 Membrane magnesium transporter 1.
10 273 Hs.108301 Nuclear receptor subfamily 2, group C, member 1.
10 273 Hs.103315 Zinc finger protein 384.
9 245 Hs.99819 Ubiquitin specific peptidase 16.
9 245 Hs.9850 Guanylyl cyclase domain containing 1.
9 245 Hs.9589 Ubiquilin 1.
9 245 Hs.93670 Zinc finger CCCH-type containing 18.
9 245 Hs.744848 KIAA1967.
9 245 Hs.744009 LSM14A, SCD6 homolog A (S. cerevisiae).
9 245 Hs.743449 Polypyrimidine tract binding protein 2.
9 245 Hs.731837 Transcribed locus, strongly similar to NP_004893.1 RBM39 gene product [Homo sapiens].
9 245 Hs.73172 Growth factor independent 1 transcription repressor.
9 245 Hs.728823 RNA binding motif protein 4.
9 245 Hs.719042 Epithelial membrane protein 1.
9 245 Hs.713476 Transcribed locus, strongly similar to XP_004010751.1 PREDICTED: protein kinase C eta type [Ovis aries].
9 245 Hs.705323 Phosphatidylinositol transfer protein, beta.
9 245 Hs.683896 CACNA1C antisense RNA 1.
9 245 Hs.657887 Acid phosphatase-like 2.
9 245 Hs.655336 Coiled-coil domain containing 69.
9 245 Hs.654803 Zinc finger protein 496.
9 245 Hs.654665 Transmembrane 9 superfamily protein member 4.
9 245 Hs.644056 Casein kinase 2, alpha 1 polypeptide.
9 245 Hs.63795 Centrosomal protein 85kDa.
9 245 Hs.632717 Myosin, light chain 6, alkali, smooth muscle and non-muscle.
9 245 Hs.632151 Fanconi anemia, complementation group F.
9 245 Hs.621695 Metastasis associated lung adenocarcinoma transcript 1 (non-protein coding).
9 245 Hs.618430 Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
9 245 Hs.611541 Mediator complex subunit 29.
9 245 Hs.599798 Zinc finger protein 655.
9 245 Hs.591908 A kinase (PRKA) anchor protein 2.
9 245 Hs.591815 RNA binding motif protein 33.
9 245 Hs.590868 Zinc finger, CCCH-type with G patch domain.
9 245 Hs.58974 Cyclin A2.
9 245 Hs.586174 Dedicator of cytokinesis 2.
9 245 Hs.579691 CD22 molecule.
9 245 Hs.571874 Sex comb on midleg homolog 1 (Drosophila).
9 245 Hs.568007 ADP-ribosylation factor-like 5C.
9 245 Hs.555956 Nudix (nucleoside diphosphate linked moiety X)-type motif 5.
9 245 Hs.536474 Transmembrane protein 106A.
9 245 Hs.533770 Solute carrier family 38, member 1.
9 245 Hs.532082 Interleukin 6 signal transducer (gp130, oncostatin M receptor).
9 245 Hs.530412 SERPINE1 mRNA binding protein 1.
9 245 Hs.529451 Diaphanous homolog 1 (Drosophila).
9 245 Hs.524250 GABA(A) receptor-associated protein like 1.
9 245 Hs.524216 Cell division cycle associated 3.
9 245 Hs.524081 Dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase).
9 245 Hs.523660 Signaling lymphocytic activation molecule family member 1.
9 245 Hs.522418 GLE1 RNA export mediator homolog (yeast).
9 245 Hs.521989 CD274 molecule.
9 245 Hs.520819 Insulin induced gene 1.
9 245 Hs.519313 AF4/FMR2 family, member 4.
9 245 Hs.517582 Minichromosome maintenance complex component 5.
9 245 Hs.516245 Uncharacterized LOC100506328.
9 245 Hs.516182 SMEK homolog 2, suppressor of mek1 (Dictyostelium).
9 245 Hs.515249 Arrestin domain containing 2.
9 245 Hs.514033 Sperm associated antigen 5.
9 245 Hs.510078 Serum/glucocorticoid regulated kinase 1.
9 245 Hs.504281 Friend leukemia virus integration 1.
9 245 Hs.501794 ATPase type 13A1.
9 245 Hs.501735 Stromal interaction molecule 1.
9 245 Hs.494173 Annexin A1.
9 245 Hs.490510 Zinc finger protein 212.
9 245 Hs.488181 Oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide).
9 245 Hs.485233 Mitogen-activated protein kinase 14.
9 245 Hs.480415 Mannosidase, beta A, lysosomal.
9 245 Hs.478429 ATPase, class VI, type 11B.
9 245 Hs.477869 Phospholipid scramblase 4.
9 245 Hs.476448 Filamin B, beta.
9 245 Hs.474596 LIM domain kinase 2.
9 245 Hs.471514 Rhomboid domain containing 1.
9 245 Hs.470907 Adenylate kinase 2.
9 245 Hs.469879 IWS1 homolog (S. cerevisiae).
9 245 Hs.468908 MAX dimerization protein 1.

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Source: NCBI UniGene

EST Sequences

41,399 EST sequences from this library have been submitted to the public sequence database as of 09-Mar-2013.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

  • thymus
  • unknown developmental stage
  • uncharacterized preparation

Source: NCBI Clone Registry



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