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UGID:510667     UniGene Zm.5695     Zea mays (maize)   pco114914
LOC100283257 (pco114914)

Maize protein-coding gene pco114914. Represented by 143 ESTs from 43 cDNA libraries. Corresponds to reference sequence NM_001156159.1. [UniGene 510667 - Zm.5695]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001149631.1 LOC100283257 Z. mays 100.0 169
NP_566128.1 glutathione peroxidase A. thaliana 79.3 169
NP_728870.1 PHGPx, isoform A D. melanogaster 56.9 166
NP_001007283.2 glutathione peroxidase 4 precursor D. rerio 56.3 157
NP_492598.1 Protein F26E4.12 C. elegans 56.2 160
NP_001165213.1 glutathione peroxidase 4 b X. laevis 54.8 165
XP_957919.1 peroxiredoxin HYR1 N. crassa 54.0 162
NP_009803.3 Gpx2p S. cerevisiae 53.1 159
XP_001693150.1 glutathione peroxidase C. reinhardtii 50.0 171
NP_032188.3 phospholipid hydroperoxide glutathione peroxidase, nuclear isoform 2 precursor M. musculus 50.0 161
NP_002076.2 phospholipid hydroperoxide glutathione peroxidase, mitochondrial isoform A precursor H. sapiens 49.1 159
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
NP_001050145.1 Os03g0358100 O. sativa 95.3 168
XP_003557888.1 PREDICTED: probable glutathione peroxidase 4-like B. distachyon 91.7 169

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; leaf; meristem; root; pericarp; silk; ovary; endosperm; unspecified tissue; shoot; aerial organ; pollen; tassel; cell culture; glume; other
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AY104663.1 Zea mays PCO114914 mRNA sequence P
EU971245.1 Zea mays clone 360158 glutathione peroxidase 4 mRNA, complete cds PA
EU965720.1 Zea mays clone 288261 glutathione peroxidase 4 mRNA, complete cds PA
EU964052.1 Zea mays clone 275503 glutathione peroxidase 4 mRNA, complete cds PA
EU960297.1 Zea mays clone 223271 glutathione peroxidase 4 mRNA, complete cds PA
BT065633.1 Zea mays full-length cDNA clone ZM_BFb0374D06 mRNA, complete cds P
NM_001156159.1 Zea mays LOC100283257 (pco114914), mRNA PA
EZ059925.1 TSA: Zea mays contig61047, mRNA sequence P

EST sequences (10 of 143) [Show all sequences]

BG840760.2 Clone MEST11-E09 silk 3' read PA
BG517478.1 aerial organ P
BG458659.1 aerial organ P
BG459001.1 aerial organ P
BE761623.1 aerial organ P
BE761677.1 aerial organ P
BE640145.1 tassel P
BE640146.1 tassel P
BE050889.1 Clone za70f10 glume 5' read P
AI636982.1 shoot


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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