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UGID:1451089     UniGene Ssc.32983     Sus scrofa (pig)  
Transcribed locus, strongly similar to NP_766363.2 plexin-B1 precursor [Mus musculus]

Pig putative protein-coding gene. Represented by 38 ESTs from 20 cDNA libraries. [UniGene 1451089 - Ssc.32983]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_533841.3 PREDICTED: plexin-B1 C. lupus familiaris 98.7 625
XP_001916405.2 PREDICTED: LOW QUALITY PROTEIN: plexin-B1 E. caballus 98.7 625
NP_001123554.1 plexin-B1 precursor H. sapiens 98.2 625
NP_766363.2 plexin-B1 precursor M. musculus 97.4 625
NP_001088457.1 uncharacterized protein LOC495321 precursor X. laevis 52.6 622
NP_726627.1 plexin A, isoform B D. melanogaster 51.0 637
XP_003201265.1 PREDICTED: plexin-A1, partial D. rerio 50.8 622
Other hits (2 of 27) [Show all]SpeciesId(%)Len(aa)
XP_003309829.1 PREDICTED: plexin-B1 isoform 1 P. troglodytes 98.1 625
XP_001098365.2 PREDICTED: plexin-B1-like M. mulatta 97.8 626

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
cDNA Sources: mixed; ovary; trachea; intestine; brain; lung; uncharacterized tissue; placenta; embryonic tissue; heart; testis; uterus; blood
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

AK238062.1 Sus scrofa mRNA, clone:TCH010036C04, expressed in trachea PA

EST sequences (10 of 38) [Show all sequences]

BP149059.1 Clone OVRM10128D04 ovary 5' read P
CO944527.1 ovary 3' read A
CO993812.1 ovary 3' read A
CJ025100.1 Clone TCH01C040036 trachea 5' read P
CJ025280.1 Clone TCH01F030038 trachea 5' read P
CV876420.1 Clone PDUts1151G05 testis 5' read
DY407950.1 mixed 5' read P
DY409303.1 mixed 3' read
DY414095.1 mixed 3' read
DY418173.1 mixed 5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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