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UGID:381897     UniGene Rn.9711     Rattus norvegicus (Norway rat)   Grin2b
Glutamate receptor, ionotropic, N-methyl D-aspartate 2B (Grin2b)

Norway rat protein-coding gene Grin2b. Represented by 7 ESTs from 4 cDNA libraries. Corresponds to reference sequence NM_012574.1. [UniGene 381897 - Rn.9711]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_036706.1 Grin2b gene product R. norvegicus 100.0 1481
NP_032197.3 Grin2b gene product M. musculus 99.6 1481
NP_000825.2 GRIN2B gene product H. sapiens 98.5 1483
NP_001104191.1 ionotropic glutamate receptor subunit NR2B precursor X. laevis 82.9 1447
NP_001121809.1 glutamate [NMDA] receptor subunit epsilon-2 D. rerio 64.0 1668
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001501691.2 PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 E. caballus 98.7 1482
XP_001088140.1 PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 M. mulatta 98.5 1483

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q43
UniSTS entry: Grin2b
UniSTS entry: RH94749
UniSTS entry: UniSTS:465389
UniSTS entry: Grin2b
UniSTS entry: RH94750
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

M91562.1 Rattus norvegicus NMDA receptor subtype 2B mRNA, complete cds P
U11419.1 Rattus norvegicus glutamate receptor subunit mRNA, complete cds P
NM_012574.1 Rattus norvegicus glutamate receptor, ionotropic, N-methyl D-aspartate 2B (Grin2b), mRNA P

EST sequences (7)

BF393197.1 Clone UI-R-CA0-bfp-h-07-0-UI mixed 3' read A
BF394665.1 Clone UI-R-CA0-bfy-d-08-0-UI mixed 3' read A
BF394826.1 Clone UI-R-CA0-bfz-d-07-0-UI mixed 3' read A
BF403422.1 Clone UI-R-CA1-biy-o-24-0-UI mixed 3' read A
CR467852.1 Clone LIONp463E02199 uncharacterized tissue 3' read
FQ098884.1 Clone TL0AAA52YH01 5' read
FQ099298.1 Clone TL0AAA50YO13 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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