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UGID:382809     UniGene Rn.11018     Rattus norvegicus (Norway rat)   Camk1
Calcium/calmodulin-dependent protein kinase I (Camk1)

Norway rat protein-coding gene Camk1. Represented by 58 ESTs from 42 cDNA libraries. Corresponds to reference sequence NM_134468.1. [UniGene 382809 - Rn.11018]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_598687.1 Camk1 gene product M. musculus 100.0 373
NP_604463.1 Camk1 gene product R. norvegicus 100.0 373
XP_001095449.1 PREDICTED: calcium/calmodulin-dependent protein kinase type 1 M. mulatta 99.7 367
XP_003894180.1 PREDICTED: calcium/calmodulin-dependent protein kinase type 1 P. anubis 99.7 367
XP_001146605.1 PREDICTED: calcium/calmodulin-dependent protein kinase type 1 isoform 4 P. troglodytes 99.7 367
NP_003647.1 CAMK1 gene product H. sapiens 99.5 367
NP_001082318.1 calcium/calmodulin-dependent protein kinase I X. laevis 89.6 366
XP_001333925.1 PREDICTED: calcium/calmodulin-dependent protein kinase type 1-like D. rerio 88.7 345
NP_500139.1 Protein CMK-1 C. elegans 72.4 326
NP_524622.1 Calcium/calmodulin-dependent protein kinase I, isoform G D. melanogaster 70.9 344
XP_001698569.1 hypothetical protein CHLREDRAFT_113407 C. reinhardtii 54.3 234
XP_959927.2 calcium/calmodulin-dependent protein kinase type I N. crassa 49.0 341
NP_197748.1 calmodulin-like domain protein kinase 9 A. thaliana 47.4 306
NP_014626.1 Cmk2p S. cerevisiae 45.9 325
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
NP_001177124.1 CAMK1 gene product S. scrofa 99.5 368
XP_541780.2 PREDICTED: calcium/calmodulin-dependent protein kinase type 1 C. lupus familiaris 99.2 368

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; heart; artery; connective tissue; dorsal root ganglion; placenta; lung; kidney; uncharacterized tissue; thymus; pancreas; brain; prostate; eye; adrenal gland; muscle; inner ear; embryonic tissue; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q42
UniSTS entry: AI505105
UniSTS entry: RH137514
UniSTS entry: D6Ertd263e
UniSTS entry: Camk1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

L24907.1 Rattus norvegicus calcium/calmodulin-dependent protein kinase I mRNA, complete cds PA
L26288.1 Rattus norvegicus CaM-like protein kinase mRNA, complete cds PA
NM_134468.1 Rattus norvegicus calcium/calmodulin-dependent protein kinase I (Camk1), mRNA PA
BC071177.1 Rattus norvegicus calcium/calmodulin-dependent protein kinase I, mRNA (cDNA clone MGC:91494 IMAGE:7098592), complete cds PA
FQ213485.1 Rattus norvegicus TL0AAA47YI22 mRNA sequence PA

EST sequences (10 of 58) [Show all sequences]

H32658.1 Clone RPCCF44 adrenal gland 5' read P
AI060013.1 Clone UI-R-C1-kz-e-06-0-UI mixed 3' read A
AI145104.1 Clone UI-R-BT0-px-c-06-0-UI mixed 3' read PA
AI171235.1 Clone RMUBH93 muscle 3' read P
AI705698.1 Clone UI-R-AD1-zp-h-01-0-UI heart 3' read PA
AI717717.1 Clone UI-R-Y0-acq-g-01-0-UI eye 3' read PA
AW251521.1 Clone UI-R-BJ0-ado-b-05-0-UI heart 3' read PA
AW252518.1 Clone UI-R-BJ0-ada-e-03-0-UI heart 3' read PA
BF395545.1 Clone UI-R-CM0-bjo-b-09-0-UI heart 3' read PA
BF410677.1 Clone UI-R-CA0-bmb-a-07-0-UI mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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