NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:552431     UniGene Rn.95276     Rattus norvegicus (Norway rat)  
TL0AEA1YJ15 mRNA sequence

Norway rat putative protein-coding gene. Represented by 43 ESTs from 17 cDNA libraries. [UniGene 552431 - Rn.95276]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_071588.2 Slc33a1 gene product R. norvegicus 98.6 207
NP_056543.2 acetyl-coenzyme A transporter 1 M. musculus 96.2 207
NP_001177921.1 SLC33A1 gene product H. sapiens 93.3 207
NP_001084638.1 solute carrier family 33 (acetyl-CoA transporter), member 1 X. laevis 75.0 208
NP_957402.1 slc33a1 gene product D. rerio 70.7 205
NP_648921.2 CG9706, isoform A D. melanogaster 50.5 202
NP_495970.1 Protein T26C5.3, isoform b C. elegans 45.3 201
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_002716358.1 PREDICTED: acetyl-coenzyme A transporter O. cuniculus 95.2 207
XP_004003278.1 PREDICTED: acetyl-coenzyme A transporter 1 O. aries 95.2 206

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: small intestine; connective tissue; uncharacterized tissue; thymus; inner ear; mixed; kidney; prostate; lung; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
UniSTS entry: AI788741
UniSTS entry: RH128989
UniSTS entry: AI315656
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

FQ226735.1 Rattus norvegicus TL0AEA1YJ15 mRNA sequence

EST sequences (10 of 43) [Show all sequences]

AA925986.1 Clone UI-R-A1-es-a-07-0-UI mixed 3' read A
BE328991.1 Clone IMAGE:3121410 prostate 3' read A
BF556357.1 Clone UI-R-A1-es-a-07-0-UI mixed 5' read
BI282044.1 Clone UI-R-CU0s-cbv-g-12-0-UI kidney 3' read A
BM389752.1 Clone UI-R-CN1-cjp-m-14-0-UI mixed 3' read A
BQ202345.1 Clone UI-R-EB1-clg-o-07-0-UI small intestine 3' read A
BQ210852.1 Clone IMAGE:7348295 connective tissue 3' read A
CB578436.1 Clone urrg1-00056-b4 uncharacterized tissue 5' read
CO555827.1 Clone IMAGE:7380188 thymus 5' read P
DV718043.1 inner ear 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help