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UGID:381547     UniGene Rn.9181     Rattus norvegicus (Norway rat)   Eif2b1
Eukaryotic translation initiation factor 2B, subunit 1 alpha (Eif2b1)

Norway rat protein-coding gene Eif2b1. Represented by 60 ESTs from 37 cDNA libraries. Corresponds to reference sequence NM_172029.2. [UniGene 381547 - Rn.9181]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_742026.1 Eif2b1 gene product R. norvegicus 100.0 304
NP_663346.1 translation initiation factor eIF-2B subunit alpha M. musculus 95.7 304
NP_001405.1 translation initiation factor eIF-2B subunit alpha H. sapiens 93.8 304
NP_001084600.1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa X. laevis 82.1 301
XP_001918432.1 PREDICTED: translation initiation factor eIF-2B subunit alpha-like isoform 1 D. rerio 73.9 290
NP_651752.1 eIF2B-alpha D. melanogaster 52.5 304
XP_001698916.1 eukaryotic initiation factor C. reinhardtii 50.5 284
NP_565041.1 eukaryotic translation initiation factor 2B domain-containing protein A. thaliana 46.3 297
NP_499106.1 Protein ZK1098.4 C. elegans 45.2 304
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
XP_001927637.1 PREDICTED: translation initiation factor eIF-2B subunit alpha S. scrofa 95.1 304
NP_001069211.1 EIF2B1 gene product B. taurus 95.1 304

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: prostate; connective tissue; heart; brain; embryonic tissue; penis; mixed; dorsal root ganglion; testis; lung; uncharacterized tissue; thymus; placenta; pancreas; spleen; liver; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q15
UniSTS entry: BI279065
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

U05821.1 Rattus norvegicus translation initiation factor eIF-2B alpha-subunit (eIF-2a) mRNA, complete cds P
NM_172029.2 Rattus norvegicus eukaryotic translation initiation factor 2B, subunit 1 alpha (Eif2b1), mRNA PA
BC081709.1 Rattus norvegicus eukaryotic translation initiation factor 2B, subunit 1 alpha, mRNA (cDNA clone MGC:93113 IMAGE:7135576), complete cds PA
FQ213561.1 Rattus norvegicus TL0AAA47YB18 mRNA sequence P
FQ217438.1 Rattus norvegicus TL0ACA26YH10 mRNA sequence PA

EST sequences (10 of 60) [Show all sequences]

AA957084.1 Clone UI-R-E1-fs-a-03-0-UI 3' read A
AA957583.1 Clone UI-R-E1-gb-a-04-0-UI 3' read A
AA997585.1 Clone UI-R-C0-hy-b-09-0-UI mixed 3' read A
AI007997.1 Clone REMAI21 embryonic tissue 3' read
AI031019.1 Clone UI-R-C0-je-h-10-0-UI mixed 3' read A
AI104699.1 Clone RHECH86 heart 3' read
AI101110.1 Clone RBRBF64 brain 3' read
AI179492.1 Clone RSPCI12 spleen 3' read
AI230485.1 Clone REMCX12 embryonic tissue 3' read
AI230685.1 Clone REMCZ94 embryonic tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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