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UGID:381528     UniGene Rn.9149     Rattus norvegicus (Norway rat)   Pak1
P21 protein (Cdc42/Rac)-activated kinase 1 (Pak1)

Norway rat protein-coding gene Pak1. Represented by 76 ESTs from 30 cDNA libraries. Corresponds to reference sequence NM_017198.1. [UniGene 381528 - Rn.9149]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_058894.1 Pak1 gene product R. norvegicus 100.0 543
NP_035165.2 Pak1 gene product M. musculus 99.8 543
NP_002567.3 PAK1 gene product H. sapiens 99.6 544
XP_002708724.1 PREDICTED: p21-activated kinase 1-like O. cuniculus 99.6 543
NP_958485.1 pak1 gene product D. rerio 89.4 576
NP_001079232.1 p21-activated kinase 3 X. laevis 89.1 561
NP_001024378.1 Protein PAK-1, isoform b C. elegans 68.2 554
XP_957292.1 hypothetical protein NCU00406 N. crassa 64.1 362
NP_650545.2 Pak3, isoform A D. melanogaster 54.4 550
NP_014528.1 Skm1p S. cerevisiae 50.6 520
XP_001700998.1 mitogen activated protein kinase kinase kinase kinase 1 C. reinhardtii 47.8 248
Other hits (2 of 50) [Show all]SpeciesId(%)Len(aa)
XP_003910504.1 PREDICTED: serine/threonine-protein kinase PAK 1 P. anubis 99.5 544
NP_001070366.1 PAK1 gene product B. taurus 99.5 543

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; muscle; ovary; small intestine; colon; connective tissue; artery; uncharacterized tissue; eye; placenta; spleen; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q32
UniSTS entry: RH129095
UniSTS entry: Pak1
UniSTS entry: AI072234
UniSTS entry: Pak1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

U23443.1 Rattus norvegicus serine/threonine protein kinase (alpha-PAK) mRNA, complete cds P
U49953.1 Rattus norvegicus protein kinase MUK2 mRNA, complete cds P
NM_017198.1 Rattus norvegicus p21 protein (Cdc42/Rac)-activated kinase 1 (Pak1), mRNA P
FQ226060.1 Rattus norvegicus TL0AEA3YC20 mRNA sequence

EST sequences (10 of 76) [Show all sequences]

AA851136.1 Clone RPLAA95 placenta 5' read P
AA943923.1 Clone RBRAR37 brain 3' read
AA955885.1 Clone UI-R-E1-ff-h-08-0-UI 3' read A
AA956985.1 Clone UI-R-E1-fq-b-11-0-UI 3' read A
AI059239.1 Clone UI-R-C1-ld-c-06-0-UI mixed 3' read A
AI072234.1 Clone UI-R-C2-mu-e-03-0-UI mixed 3' read PA
AI112468.1 Clone UI-R-Y0-mm-g-05-0-UI eye 3' read A
AI101647.1 Clone RBRBT33 brain 3' read
AI102330.1 Clone RBRCC18 brain 3' read A
AI172085.1 Clone RMUBU72 muscle 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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