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UGID:439499     UniGene Rn.91361     Rattus norvegicus (Norway rat)   Gria2
Glutamate receptor, ionotropic, AMPA 2 (Gria2)

Norway rat protein-coding gene Gria2. Represented by 64 ESTs from 30 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 439499 - Rn.91361]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001077280.1 Gria2 gene product R. norvegicus 100.0 882
NP_038568.2 Gria2 gene product M. musculus 99.9 882
NP_001077088.1 GRIA2 gene product H. sapiens 99.8 882
NP_001172045.1 glutamate receptor 2 isoform 2 precursor B. taurus 99.8 882
XP_003482437.1 PREDICTED: glutamate receptor 2 isoform 2 S. scrofa 99.7 885
NP_001172017.2 glutamate receptor 2 isoform 2 precursor E. caballus 99.7 882
XP_004017337.1 PREDICTED: glutamate receptor 2 isoform 2 O. aries 99.7 882
XP_002716955.1 PREDICTED: glutamate receptor, ionotropic, AMPA2 (alpha 2)-like O. cuniculus 99.7 882
XP_003899352.1 PREDICTED: glutamate receptor 2 isoform 1 P. anubis 99.5 882
NP_001171924.2 glutamate receptor 2 isoform 2 precursor P. troglodytes 99.5 882
NP_001153152.1 glutamate receptor 2 X. laevis 95.1 881
NP_571970.2 gria2b gene product D. rerio 90.6 878
NP_498887.2 Protein GLR-1 C. elegans 45.5 811
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
NP_001171943.2 glutamate receptor 2 isoform 2 precursor M. mulatta 99.3 882
XP_003428583.1 PREDICTED: glutamate receptor 2 isoform 3 O. anatinus 97.8 882

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; pituitary gland; uncharacterized tissue; pineal gland; eye; inner ear; embryonic tissue; pancreas; ovary
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q33
UniSTS entry: L32372
UniSTS entry: Gria2
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

M38061.1 Rattus norvegicus glutamate receptor (GluR-B) mRNA, complete cds P
M85035.1 Rat glutamate receptor subunit 2 (GLUR2) non-NMDA mRNA, complete cds P
X54655.1 Rat GluR-K2 gene for the glutamate receptor P
AF164344.1 Rattus norvegicus glutamate receptor subunit GluR2-flip mRNA, complete cds PA
NM_017261.2 Rattus norvegicus glutamate receptor, ionotropic, AMPA 2 (Gria2), transcript variant 1, mRNA P
M36419.1 Rat glutamate receptor (GluR-B) mRNA, complete cds P
NM_001083811.1 Rattus norvegicus glutamate receptor, ionotropic, AMPA 2 (Gria2), transcript variant 2, mRNA P

EST sequences (10 of 64) [Show all sequences]

AA957445.1 Clone UI-R-E1-fy-g-12-0-UI 3' read P
AA999148.1 Clone UI-R-E1-fy-g-12-0-UI 3' read
AI072657.1 Clone UI-R-C2-nn-h-12-0-UI mixed 3' read P
AI175615.1 Clone ROVBC65 ovary 3' read
AI412201.1 Clone RBRDW93 brain 3' read
AW523170.1 Clone UI-R-BO0-ahs-b-03-0-UI brain 3' read A
AW524441.1 Clone UI-R-BO0-ahx-d-12-0-UI brain 3' read A
AW915231.1 Clone RGICM94 embryonic tissue 5' read
AW915233.1 Clone RGICM96 embryonic tissue 5' read
AW507408.1 Clone 4thC6 brain

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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