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UGID:381131     UniGene Rn.8509     Rattus norvegicus (Norway rat)   Tmed10
Transmembrane emp24-like trafficking protein 10 (yeast) (Tmed10)

Norway rat protein-coding gene Tmed10. Represented by 118 ESTs from 61 cDNA libraries. Corresponds to reference sequence NM_053467.1. [UniGene 381131 - Rn.8509]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_445919.1 Tmed10 gene product R. norvegicus 100.0 218
NP_081051.1 transmembrane emp24 domain-containing protein 10 precursor M. musculus 99.5 218
XP_001491955.1 PREDICTED: transmembrane emp24 domain-containing protein 10-like E. caballus 99.5 218
NP_006818.3 transmembrane emp24 domain-containing protein 10 precursor H. sapiens 98.6 218
NP_999863.1 tmed10 gene product D. rerio 93.1 202
NP_001090170.1 p24 delta1 putative cargo receptor precursor X. laevis 90.1 201
NP_651323.3 baiser D. melanogaster 71.5 185
NP_505879.1 Protein F47G9.1 C. elegans 66.2 200
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001506639.2 PREDICTED: transmembrane emp24 domain-containing protein 10-like O. anatinus 99.3 144
XP_854043.1 PREDICTED: transmembrane emp24 domain-containing protein 10 isoform 1 C. lupus familiaris 99.1 218

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; salivary gland; pituitary gland; colon; lung; embryonic tissue; placenta; spleen; cervix; mixed; brain; ovary; thymus; prostate; pancreas; kidney; heart; liver; uncharacterized tissue; dorsal root ganglion; adrenal gland; vibrissa
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q31
UniSTS entry: RH130037
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

X97443.1 R.norvegicus mRNA for transmembrane protein Tmp21-I P
AJ004912.1 Rattus norvegicus mRNA for integral membrane protein Tmp21-I (p23) PA
NM_053467.1 Rattus norvegicus transmembrane emp24-like trafficking protein 10 (yeast) (Tmed10), mRNA PA
FQ210492.1 Rattus norvegicus TL0ABA27YM17 mRNA sequence
FQ212056.1 Rattus norvegicus TL0AAA71YF09 mRNA sequence PA

EST sequences (10 of 118) [Show all sequences]

H33245.1 Clone RPNAK54 adrenal gland 3' read A
H33246.1 Clone RPNAK54 adrenal gland 5' read P
AA956198.1 Clone UI-R-E1-fi-a-11-0-UI 3' read A
AA957764.1 Clone UI-R-E1-fv-e-06-0-UI 3' read A
AA957872.1 Clone UI-R-E1-fv-e-06-0-UI 3' read A
AA997494.1 Clone UI-R-C0-hw-e-06-0-UI mixed 3' read A
AI008685.1 Clone REMBB63 embryonic tissue 3' read A
AI013764.1 Clone RSPBS55 spleen 3' read A
AI030807.1 Clone UI-R-C0-je-b-01-0-UI mixed 3' read A
AI704159.1 Clone UI-R-AC0-yi-c-07-0-UI embryonic tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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