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UGID:379216     UniGene Rn.4042     Rattus norvegicus (Norway rat)   Rps6kb1
Ribosomal protein S6 kinase, polypeptide 1 (Rps6kb1)

Norway rat protein-coding gene Rps6kb1. Represented by 44 ESTs from 32 cDNA libraries. Corresponds to reference sequence NM_031985.1. [UniGene 379216 - Rn.4042]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_114191.1 Rps6kb1 gene product R. norvegicus 100.0 524
NP_001107806.1 Rps6kb1 gene product M. musculus 99.8 524
XP_001139182.1 PREDICTED: ribosomal protein S6 kinase beta-1 isoform 2 P. troglodytes 99.8 524
NP_003152.1 RPS6KB1 gene product H. sapiens 99.8 524
XP_867353.2 PREDICTED: ribosomal protein S6 kinase beta-1 isoform 4 C. lupus familiaris 99.8 524
XP_001503803.1 PREDICTED: ribosomal protein S6 kinase beta-1 E. caballus 99.8 524
NP_001095160.1 RPS6KB1 gene product O. cuniculus 99.8 524
NP_991385.1 RPS6KB1 gene product B. taurus 99.6 525
XP_003131719.1 PREDICTED: ribosomal protein S6 kinase beta-1 isoform 1 S. scrofa 99.6 524
NP_001080935.1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 X. laevis 94.8 500
NP_998241.1 rps6kb1b gene product D. rerio 92.4 501
NP_523941.2 RPS6-p70-protein kinase, isoform A D. melanogaster 78.4 366
NP_499447.2 Protein RSKS-1 C. elegans 68.5 518
NP_187484.1 serine/threonine protein kinase 2 A. thaliana 50.5 370
XP_965297.1 AGC family protein serine/threonine kinase domain-containing protein N. crassa 49.6 375
NP_015121.1 Tpk2p S. cerevisiae 49.1 287
XP_001693559.1 ribosomal protein S6 kinase C. reinhardtii 48.0 318
Other hits (2 of 53) [Show all]SpeciesId(%)Len(aa)
XP_004013231.1 PREDICTED: ribosomal protein S6 kinase beta-1 O. aries 99.4 483
XP_001509850.2 PREDICTED: ribosomal protein S6 kinase beta-1-like O. anatinus 99.2 484

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; embryonic tissue; heart; muscle; small intestine; uncharacterized tissue; pineal gland; pituitary gland; spleen; thymus; placenta; inner ear; eye; pancreas; colon; kidney; lung
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q26
UniSTS entry: RH136097
UniSTS entry: RH127558
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

M58340.1 Rat S6 protein kinase mRNA, complete cds PA
NM_031985.1 Rattus norvegicus ribosomal protein S6 kinase, polypeptide 1 (Rps6kb1), mRNA PA
BC089789.1 Rattus norvegicus ribosomal protein S6 kinase, polypeptide 1, mRNA (cDNA clone IMAGE:7365967) PA

EST sequences (10 of 44) [Show all sequences]

AA819014.1 Clone UI-R-A0-ao-h-03-0-UI mixed 3' read A
AA849893.1 Clone RMUAK24 muscle 3' read
AA851952.1 Clone RSPAO73 spleen 3' read A
AA900032.1 Clone UI-R-E0-dh-f-01-0-UI embryonic tissue 3' read A
AI071422.1 Clone UI-R-C2-nb-g-07-0-UI mixed 3' read A
AI601966.1 Clone UI-R-Y0-uv-c-02-0-UI eye 3' read A
AW918166.1 Clone RGIEN27 mixed 5' read P
BE109204.1 Clone UI-R-BS1-azd-b-04-0-UI embryonic tissue 3' read A
BE110856.1 Clone UI-R-BJ1-aus-g-05-0-UI heart 3' read A
BF284241.1 Clone RGIEN27 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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