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UGID:396970     UniGene Rn.37227     Rattus norvegicus (Norway rat)   Egfr
Epidermal growth factor receptor (Egfr)

Norway rat protein-coding gene Egfr. Represented by 21 ESTs from 15 cDNA libraries. Corresponds to reference sequence NM_031507.1. [UniGene 396970 - Rn.37227]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_113695.1 Egfr gene product R. norvegicus 100.0 1208
NP_997538.1 Egfr gene product M. musculus 96.3 1209
NP_005219.2 EGFR gene product H. sapiens 91.3 1209
NP_919405.1 egfra gene product D. rerio 68.0 1174
NP_001089061.1 v-erb-a erythroblastic leukemia viral oncogene homolog 4 precursor X. laevis 56.8 1244
NP_476758.1 epidermal growth factor receptor, isoform A D. melanogaster 47.4 1182
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_001497780.2 PREDICTED: epidermal growth factor receptor E. caballus 92.5 1180
XP_533073.3 PREDICTED: epidermal growth factor receptor C. lupus familiaris 92.0 1177

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; lung; liver; adipose tissue; embryonic tissue; prostate; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14q22
UniSTS entry: AA996669
UniSTS entry: X78987
UniSTS entry: Egfr
UniSTS entry: Egfr
UniSTS entry: RH142721
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

M37394.2 Rattus norvegicus epidermal growth factor receptor (Egfr) mRNA, complete cds P
NM_031507.1 Rattus norvegicus epidermal growth factor receptor (Egfr), mRNA P
U52529.1 Rattus norvegicus EGF receptor mRNA, partial cds P
AB079120.1 Rattus norvegicus egfr mRNA for epidermal growth factor receptor, partial cds P
HM801042.1 Rattus norvegicus strain Sprague-Dawley epidermal growth factor receptor (Egfr) mRNA, complete cds P
HM801041.1 Rattus norvegicus strain Yuyi Curly Hair epidermal growth factor receptor (Egfr) mRNA, complete cds P

EST sequences (10 of 21) [Show all sequences]

AI549431.1 Clone UI-R-C3-ua-g-03-0-UI mixed 3' read A
AW523726.1 Clone UI-R-BO0-aih-d-10-0-UI brain 3' read A
BE104053.1 Clone UI-R-BX0-ark-b-10-0-UI embryonic tissue 3' read A
BF522465.1 Clone UI-R-C3-ua-g-03-0-UI mixed 5' read
BI290046.1 Clone UI-R-DK0-cfr-b-11-0-UI mixed 3' read A
BM384959.1 Clone UI-R-CN1-cjl-l-10-0-UI mixed 3' read A
BM387295.1 Clone UI-R-CN1-cjh-h-11-0-UI mixed 3' read A
CA340048.1 Clone IMAGE:5623095 prostate 5' read P
CA505284.1 Clone UI-R-FJ0-cpy-d-08-0-UI embryonic tissue 3' read A
CA511774.1 Clone UI-R-FJ0-cpy-d-08-0-UI embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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